RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PRR23D2P0DMB1 279 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CRYMQ14894 314 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ANO5Q75V66 913 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF571Q7Z3V5 609 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 KCNK18Q7Z418 384 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 UTP15Q8TED0 518 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TBL1YQ9BQ87 522 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 POLG2Q9UHN1 485 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PTPRJQ12913 1337 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 DIP2AQ14689 1571 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TSC22D2O75157 780 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CYP2C18P33260 490 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 FOXM1Q08050 763 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TMEM154Q6P9G4 183 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RFWD3Q6PCD5 774 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SPATS2Q86XZ4 545 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TDRD5Q8NAT2 981 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 H0YC42 278 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 TIE1P35590 1138 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 GRIK3Q13003 919 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 TRADDQ15628 312 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 RETSATQ6NUM9 610 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 SLC5A5Q92911 643 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 MRPL9Q9BYD2 267 aaKnown RBP7.96□□□□□ -1.13
SCN9A-201ENST00000303354 RASSF10A6NK89 507 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 AP3B1O00203 1094 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 FDFT1P37268 417 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 ATP13A4Q4VNC1 1196 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 GPAT3Q53EU6 434 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 FBXO48Q5FWF7 155 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 HECTD3Q5T447 861 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 TNS4Q8IZW8 715 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF606Q8WXB4 792 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 KRT35Q92764 455 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 KCND2Q9NZV8 630 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 TUBGCP4Q9UGJ1 667 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 ENPP3O14638 875 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 OR10H2O60403 315 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-201ENST00000303354 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 ASZ1Q8WWH4 475 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 NAALADL1Q9UQQ1 740 aa7.96□□□□□ -1.13
SCN9A-201ENST00000303354 A0A1W2PQH9 124 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ANKDD1BA6NHY2 528 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 C9IYK1 514 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 PHGDHO43175 533 aaKnown RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 SERPINF2P08697 491 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 PTPN3P26045 913 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 SERPINB9P50453 376 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ATP12AP54707 1039 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 GJA9P57773 515 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 USP41Q3LFD5 358 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 CBWD6Q4V339 395 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 MACC1Q6ZN28 852 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 BBS7Q8IWZ6 715 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 PARP8Q8N3A8 854 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF473Q8WTR7 871 aaKnown RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 KLHL1Q9NR64 748 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 A0A0A6YYK5 440 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 FAM107AO95990 144 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 GLUD1P00367 558 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 CENPCQ03188 943 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF621Q6ZSS3 439 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 SLC13A5Q86YT5 568 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 RIOX2Q8IUF8 465 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 FNDC5Q8NAU1 212 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ATAD1Q8NBU5 361 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 RABGEF1Q9UJ41 708 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 PACSIN3Q9UKS6 424 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 STBD1O95210 358 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 CYP2A6P11509 494 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF23P17027 643 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 AMZ1Q400G9 498 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 SMG7Q92540 1137 aaKnown RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 DEPDC7Q96QD5 511 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 EIF2AQ9BY44 585 aaKnown RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 REXO4Q9GZR2 422 aaKnown RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 WDR41Q9HAD4 459 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 MID1IP1Q9NPA3 183 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 F8VP50 259 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 SLC31A1O15431 190 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ZW10O43264 779 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ATP6V1B1P15313 513 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 RBL1P28749 1068 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 NFE2Q16621 373 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 TC2NQ8N9U0 490 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF711Q9Y462 761 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 CCND3P30281 292 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-201ENST00000303354 LAMB3Q13751 1172 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 BOLA3Q53S33 107 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 RIPOR1Q6ZS17 1223 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 KRT77Q7Z794 578 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 OSBPL6Q9BZF3 934 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 POMKQ9H5K3 350 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms