RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TFDP3Q5H9I0 405 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 THAP2Q9H0W7 228 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MID1IP1Q9NPA3 183 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF232Q9UNY5 417 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 EFR3BQ9Y2G0 817 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 FLT1P17948 1338 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MYMKA6NI61 221 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CYB561D2O14569 222 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ETS1P14921 441 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 HSD3B2P26439 372 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 KLRC1P26715 233 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 RENBPP51606 427 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ARF3P61204 181 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ARF1P84077 181 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SCRN3Q0VDG4 424 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 XRCC4Q13426 336 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ACOX1Q15067 660 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 QPRTQ15274 297 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 KLHDC7AQ5VTJ3 777 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 DOK6Q6PKX4 331 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SYT12Q8IV01 421 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SRBD1Q8N5C6 995 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF655Q8N720 491 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 PJA1Q8NG27 643 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 OR56A4Q8NGH8 313 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CELF1Q92879 486 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 C9orf16Q9BUW7 83 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ING4Q9UNL4 249 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 NCKAP1Q9Y2A7 1128 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MRASO14807 208 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CD151P48509 253 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CDC42P60953 191 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 LRRC17Q8N6Y2 441 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 GPRC5AQ8NFJ5 357 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 METTL6Q8TCB7 284 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 C18orf25Q96B23 403 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 UBP1Q9NZI7 540 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 DPP7Q9UHL4 492 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZMYM5Q9UJ78 669 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SNUPNO95149 360 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 LTFP02788 710 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 VDRP11473 427 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 S100A3P33764 101 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ITGADQ13349 1161 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ALX1Q15699 326 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 DSELQ8IZU8 1212 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 KBTBD7Q8WVZ9 684 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 THG1LQ9NWX6 298 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 VANGL2Q9ULK5 521 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MGAT4AQ9UM21 535 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 A0A1W2PQJ5 194 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CES2O00748 559 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SH3BGRLO75368 114 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 EPN2O95208 641 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 MGAT5Q09328 741 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 BMPR2Q13873 1038 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 RETSATQ6NUM9 610 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 GJB7Q6PEY0 223 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 EIF3MQ7L2H7 374 aaKnown RBP10.58□□□□□ -0.72
CLIP1-201ENST00000302528 BRSK2Q8IWQ3 736 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 ZNF354BQ96LW1 612 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 RHOBTB2Q9BYZ6 727 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 INVSQ9Y283 1065 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 PLEKHG2Q9H7P9 1386 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 USP6P35125 1406 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 RBAK-RBAKDNI3L0D1 243 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 VPS4BO75351 444 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 FBXO21O94952 628 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 IDH2P48735 452 aaKnown RBP10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SWI5Q1ZZU3 235 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CYP2R1Q6VVX0 501 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 OR6Y1Q8NGX8 325 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 C1QTNF1Q9BXJ1 281 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 GIT1Q9Y2X7 761 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 GSG1L2A8MUP6 293 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 RGS14O43566 566 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SERPINF2P08697 491 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 COX7A2P14406 83 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CHN2P52757 468 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 PRKAG1P54619 331 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 FMR1Q06787 632 aaKnown RBP eCLIP10.58□□□□□ -0.724e-6■■■■□ 21.6
CLIP1-201ENST00000302528 ZNF543Q08ER8 600 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 STK4Q13043 487 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 MSANTD1Q6ZTZ1 278 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms