RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 KNL1Q8NG31 2342 aa11.65□□□□□ -0.55
CLCC1-201ENST00000302500 C2CD4BA6NLJ0 364 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 TIMM44O43615 452 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 PAGE1O75459 146 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 LUC7L3O95232 432 aaKnown RBP11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CYBBP04839 570 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 DLDP09622 509 aaKnown RBP11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CTSOP43234 321 aaPredicted RBP11.64□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF165P49910 485 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 LIMK1P53667 647 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 UBXN1Q04323 297 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 SF3A2Q15428 464 aaKnown RBP11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 MBLAC2Q68D91 279 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 OR6B2Q6IFH4 312 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 TCEAL6Q6IPX3 200 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CHST9Q7L1S5 443 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.64□□□□□ -0.55
CLCC1-201ENST00000302500 APCDD1Q8J025 514 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 KDM1BQ8NB78 822 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 JOSD2Q8TAC2 188 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CYB5D2Q8WUJ1 264 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 GOLGA1Q92805 767 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 TCEAL3Q969E4 200 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 ORAI3Q9BRQ5 295 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 SMOC1Q9H4F8 434 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 MYO6Q9UM54 1294 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
CLCC1-201ENST00000302500 LNP1A1A4G5 178 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 SYCE3A1L190 88 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 M0QYT0 321 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CAPN9O14815 690 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 GJB6O95452 261 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 HLA-EP13747 358 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CCR1P32246 355 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 GGCXP38435 758 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 MPLP40238 635 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 PRKCIP41743 596 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 STAT1P42224 750 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CDK17Q00537 523 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CCDC6Q16204 474 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 PLEKHG6Q3KR16 790 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CCDC14Q49A88 953 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 USP39Q53GS9 565 aaKnown RBP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 FIGNQ5HY92 759 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 PITRM1Q5JRX3 1037 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 FKBP15Q5T1M5 1219 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 SH3PXD2AQ5TCZ1 1133 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 C11orf74Q86VG3 221 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 ERICH1Q86X53 443 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CIR1Q86X95 450 aaPredicted RBP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 MFN1Q8IWA4 741 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 CCAR2Q8N163 923 aaKnown RBP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 SLC30A5Q8TAD4 765 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 FRS2Q8WU20 508 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF419Q96HQ0 510 aaPredicted RBP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 MTG2Q9H4K7 406 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 PRSS16Q9NQE7 514 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 RRN3Q9NYV6 651 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLCC1-201ENST00000302500 AIPL1Q9NZN9 384 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 GMEB2Q9UKD1 530 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 PILRBQ9UKJ0 227 aa11.63□□□□□ -0.55
CLCC1-201ENST00000302500 A0A1B0GVM2 712 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 FAM170AA1A519 330 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 TCAF2A6NFQ2 919 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 PATE3B3GLJ2 98 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CDX4O14627 284 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CNTN5O94779 1100 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 ALDH1A2O94788 518 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 MOCS2O96007 188 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 MZF1P28698 734 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CSKP41240 450 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 PTPN9P43378 593 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 HDAC4P56524 1084 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 NRG1Q02297 640 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 LMNB2Q03252 620 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 RSPO4Q2I0M5 234 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 ALFQ53S48 1182 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 BRMS1LQ5PSV4 323 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 FAM102AQ5T9C2 384 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 TRIM72Q6ZMU5 477 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 NUDT18Q6ZVK8 323 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CEP68Q76N32 757 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 LUZP1Q86V48 1076 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 LGI2Q8N0V4 545 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 EMC1Q8N766 993 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF366Q8N895 744 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 C1orf74Q96LT6 269 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CFAP57Q96MR6 1250 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 PSMB7Q99436 277 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 MAGEB5Q9BZ81 275 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms