RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MRPS31Q92665 395 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CELF6Q96J87 481 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 FERMT1Q9BQL6 677 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 ADAM7Q9H2U9 754 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 MPP6Q9NZW5 540 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 PAK5Q9P286 719 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 NCAM2O15394 837 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 IRF1P10914 325 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CYP4F8P98187 520 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 FAM182AQ5T1J6 154 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ARTNQ5T4W7 220 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 PDE12Q6L8Q7 609 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CCDC25Q86WR0 208 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ZNF683Q8IZ20 524 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 RTL3Q8N8U3 475 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ZYG11BQ9C0D3 744 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CLUHO75153 1309 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CEP290O15078 2479 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 RANBP2P49792 3224 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CLASP2O75122 1294 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 RFPL2O75678 378 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 EPCAMP16422 314 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 SLC11A2P49281 568 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 GALNT2Q10471 571 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 MORF4L2Q15014 288 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 RNASEH2BQ5TBB1 312 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 FBXL22Q6P050 247 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 PCGF5Q86SE9 256 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 LZTR1Q8N653 840 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 SMPD4Q9NXE4 827 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 SEPT10Q9P0V9 454 aa13.36□□□□□ -0.27
CCDC7-202ENST00000302316 PPARGC1AQ9UBK2 798 aaKnown RBP13.36□□□□□ -0.27
CCDC7-202ENST00000302316 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 GOLGA6L7A0A1B0GV03 622 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 F5H5T6 163 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 DFFAO00273 331 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 ACSL4O60488 711 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 STC2O76061 302 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 MYL4P12829 197 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 TACR2P21452 398 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 CDC25CP30307 473 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 CHKAP35790 457 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 TFAP2DQ7Z6R9 452 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 PPIL6Q8IXY8 311 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 UBLCP1Q8WVY7 318 aaPredicted RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 P2RY11Q96G91 374 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 SLC22A12Q96S37 553 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 GDF15Q99988 308 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 KLF16Q9BXK1 252 aaPredicted RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 KLC2Q9H0B6 622 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 BRD8Q9H0E9 1235 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 ATXN3LQ9H3M9 355 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 SHOC2Q9UQ13 582 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
CCDC7-202ENST00000302316 OBSL1O75147 1896 aa13.35□□□□□ -0.27
CCDC7-202ENST00000302316 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 IGLV3-10A0A075B6K4 115 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 A0A1W2PRU2 124 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 C5orf60A6NFR6 353 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 WASH4PA8MWX3 477 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 RNF103O00237 685 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PER2O15055 1255 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 GCATO75600 419 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ZNF189O75820 626 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 C1RP00736 705 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 RHOQP17081 205 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 IRAK1P51617 712 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 SLMAPQ14BN4 828 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms