RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 OR52L1Q8NGH7 329 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 SPAG4Q9NPE6 437 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 PP2D1A8MPX8 630 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 SLC26A3P40879 764 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 COPZ1P61923 177 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 GRIK3Q13003 919 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 IZUMO1Q8IYV9 350 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 ZCCHC9Q8N567 271 aaKnown RBP11.53□□□□□ -0.56
GCN1-201ENST00000300648 DPY30Q9C005 99 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 RAD18Q9NS91 495 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 TAS2R13Q9NYV9 303 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 FAM92AA1XBS5 289 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 PRRG1O14668 218 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
GCN1-201ENST00000300648 PRKCEQ02156 737 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 ITGB3BPQ13352 177 aaPredicted RBP11.53□□□□□ -0.56
GCN1-201ENST00000300648 SMTNL2Q2TAL5 461 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 EHD3Q9NZN3 535 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 HBS1LQ9Y450 684 aaKnown RBP11.53□□□□□ -0.56
GCN1-201ENST00000300648 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
GCN1-201ENST00000300648 FCHO1O14526 889 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 FARP2O94887 1054 aaPredicted RBP11.52□□□□□ -0.56
GCN1-201ENST00000300648 HERC6Q8IVU3 1022 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 SGF29Q96ES7 293 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 PANX3Q96QZ0 392 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 ERGIC3Q9Y282 383 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 A0A1W2PRG6 482 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 NPTXRO95502 500 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 ITGA4P13612 1032 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 ITGB6P18564 788 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 PGS1Q32NB8 556 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 FUT11Q495W5 492 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 CXXC5Q7LFL8 322 aaKnown RBP11.52□□□□□ -0.56
GCN1-201ENST00000300648 AKAP14Q86UN6 197 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 THAP2Q9H0W7 228 aa11.52□□□□□ -0.56
GCN1-201ENST00000300648 KCNH1O95259 989 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 SQLEQ14534 574 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 FUKQ8N0W3 1084 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 DPF2Q92785 391 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 MAF1Q9H063 256 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 SSNA1O43805 119 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ACOT2P49753 483 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ST3GAL1Q11201 340 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 PKN1Q16512 942 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 SWT1Q5T5J6 900 aaKnown RBP11.52□□□□□ -0.57
GCN1-201ENST00000300648 GJD3Q8N144 294 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ATXN10Q9UBB4 475 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 LHX1P48742 406 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 MFSD4BQ5TF39 518 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 KIF1AQ12756 1690 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 H3BQF6 201 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 SEC24AO95486 1093 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 POU1F1P28069 291 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ENPEPQ07075 957 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 Q4G0T1 1027 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 AAGABQ6PD74 315 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 MREGQ8N565 214 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 CYLDQ9NQC7 956 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
GCN1-201ENST00000300648 MOV10Q9HCE1 1003 aaKnown RBP11.52□□□□□ -0.57
GCN1-201ENST00000300648 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
GCN1-201ENST00000300648 UNC5CO95185 931 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 OVGP1Q12889 678 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NR1D2Q14995 579 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NEDD8Q15843 81 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 BRINP3Q76B58 766 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 OR6J1Q8NGC5 347 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 ZNF671Q8TAW3 534 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 BLOC1S5Q8TDH9 187 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 EFR3BQ9Y2G0 817 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 H3BN98 237 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 IFRD1O00458 451 aaPredicted RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 HS6ST1O60243 411 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 MAPK9P45984 424 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 GPR15P49685 360 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 PLD1Q13393 1074 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 EEF1AKMT1Q8WVE0 214 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 MXRA8Q9BRK3 442 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 CHST12Q9NRB3 414 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NUDT5Q9UKK9 219 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PRPF19Q9UMS4 504 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 CRYL1Q9Y2S2 319 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 ERN1O75460 977 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 TXNP10599 105 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 STARP49675 285 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms