RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 THRAP10827 490 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 TFE3P19532 575 aaPredicted RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 RALGDSQ12967 914 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 STILQ15468 1287 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 IL23RQ5VWK5 629 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 TRNP1Q6NT89 227 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 C16orf89Q6UX73 402 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 FAM183BPQ6ZVS7 135 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 PDCD6IPQ8WUM4 868 aaKnown RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 SGF29Q96ES7 293 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 LGMNQ99538 433 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 APOL2Q9BQE5 337 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 COQ10BQ9H8M1 238 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 PFDN4Q9NQP4 134 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 DNAJC28Q9NX36 388 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 DCDC2Q9UHG0 476 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 BLOC1S6Q9UL45 172 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 XIRP1Q702N8 1843 aaKnown RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 TMX2-CTNND1H3BSU7 103 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 DENRO43583 198 aaKnown RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 CYP2F1P24903 491 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 GRK2P25098 689 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 ASPAP45381 313 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 FSTL1Q12841 308 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 C12orf29Q8N999 325 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 RNF149Q8NC42 400 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 DDI1Q8WTU0 396 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 LRTOMTQ8WZ04 291 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 ANKRD36BP1Q96IX9 119 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 KLHL32Q96NJ5 620 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 RTKNQ9BST9 563 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 CNPY3Q9BT09 278 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 PAIP1Q9H074 479 aaKnown RBP15.02■□□□□ -0
COL6A2-201ENST00000300527 CDH19Q9H159 772 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 ZNF302Q9NR11 478 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 RAB26Q9ULW5 256 aa15.02■□□□□ -0
COL6A2-201ENST00000300527 CASQ2O14958 399 aaPredicted RBP15.02□□□□□ -0.01
COL6A2-201ENST00000300527 CXCL8P10145 99 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 CAPSQ13938 189 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 SPNS2Q8IVW8 549 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 SCUBE3Q8IX30 993 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 AHI1Q8N157 1196 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF786Q8N393 782 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 SPATA6LQ8N4H0 392 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 PCDH18Q9HCL0 1135 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 SNX15Q9NRS6 342 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 PAIP2BQ9ULR5 123 aaKnown RBP15.02□□□□□ -0.01
COL6A2-201ENST00000300527 CEPT1Q9Y6K0 416 aa15.02□□□□□ -0.01
COL6A2-201ENST00000300527 ME2P23368 584 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 CHRNA5P30532 468 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ATP1A4Q13733 1029 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 WDR49Q8IV35 697 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 TMEM192Q8IY95 271 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 DCLK2Q8N568 766 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF669Q96BR6 464 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 FERMT1Q9BQL6 677 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 HAUS8Q9BT25 410 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ITGB3P05106 788 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ARSAP15289 507 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 LSM12Q3MHD2 195 aaKnown RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 MTX3Q5HYI7 312 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 SNRNP48Q6IEG0 339 aaKnown RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 PATL1Q86TB9 770 aaKnown RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 B3GNT5Q9BYG0 378 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ELOVL4Q9GZR5 314 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 RBM38Q9H0Z9 239 aaKnown RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 TIMMDC1Q9NPL8 285 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 SYBUQ9NX95 663 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 SAC3D1A6NKF1 404 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 STBD1O95210 358 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 MMP10P09238 476 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 CKMT2P17540 419 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 SDC4P31431 198 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 ZNF143P52747 638 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 EMP3P54852 163 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 STRA8Q7Z7C7 330 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 CDKL3Q8IVW4 592 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-201ENST00000300527 DNAAF3Q8N9W5 541 aa15.01□□□□□ -0.01
COL6A2-201ENST00000300527 PIGNO95427 931 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 NAMPTP43490 491 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 SLC5A3P53794 718 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 PLOD1Q02809 727 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 PTK2BQ14289 1009 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 C7orf31Q8N865 590 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 SREK1Q8WXA9 508 aaKnown RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 AGAP2Q99490 1192 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 GCOM2Q9BZD3 368 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 PORCNQ9H237 461 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 EPB41L1Q9H4G0 881 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 ARMC7Q9H6L4 198 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 TASP1Q9H6P5 420 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 RPAP3Q9H6T3 665 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 RIMS3Q9UJD0 308 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 PCDHGC3Q9UN70 934 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
COL6A2-201ENST00000300527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15□□□□□ -0.01
COL6A2-201ENST00000300527 A0A096LPK6 155 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms