RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PSMD4P55036 377 aaKnown RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SLC45A4Q5BKX6 768 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 GRTP1Q5TC63 336 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 ACTL9Q8TC94 416 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 S100ZQ8WXG8 99 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SLC25A23Q9BV35 468 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 RUSC1Q9BVN2 902 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SEMA6BQ9H3T3 888 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 PCDH12Q9NPG4 1184 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 TRNAU1APQ9NX07 287 aaKnown RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 TBX20Q9UMR3 447 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 FAM237BA0A1B0GVD1 139 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 UBE2QL1A1L167 161 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 OR6B1O95007 311 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 PBLDP30039 288 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 ALDH9A1P49189 494 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 FOLH1Q04609 750 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CCDC157Q569K6 752 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 NT5DC3Q86UY8 548 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 COMMD2Q86X83 199 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SYTL5Q8TDW5 730 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 MARK4Q96L34 752 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 KATNAL1Q9BW62 490 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 GANQ9H2C0 597 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 BCORL1Q5H9F3 1711 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 LTFP02788 710 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 PPP2R1BP30154 601 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 C5orf22Q49AR2 442 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 ERICH5Q6P6B1 374 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 EFCAB3Q8N7B9 438 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 KLHL28Q9NXS3 571 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 A0A096LPK6 155 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CYP2C8P10632 490 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 RCVRNP35243 200 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CYP4F2P78329 520 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CYP4F3Q08477 520 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 GSTA3Q16772 222 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 LRRC20Q8TCA0 184 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 BCL2L14Q9BZR8 327 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CUEDC1Q9NWM3 386 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 DOLKQ9UPQ8 538 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 STARD13Q9Y3M8 1113 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 DYRK1BQ9Y463 629 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CNTNAP5Q8WYK1 1306 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 JCHAINP01591 159 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 ATP5BP06576 529 aaKnown RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 MSL3P1P0C860 447 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 HPGDP15428 266 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 USP46P62068 366 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 INO80DQ53TQ3 878 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CFAP65Q6ZU64 1925 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 MAP2K7O14733 419 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 TFECO14948 347 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 ECE2O60344 883 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 SYNCRIPO60506 623 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 SEC22BO75396 215 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 VAV1P15498 845 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 TPH1P17752 444 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 MAGEA2P43356 314 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 BAG6P46379 1132 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 ARMC6Q6NXE6 501 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 YAF2Q8IY57 180 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 RPRD1AQ96P16 312 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 PSIP1O75475 530 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 STAU1O95793 577 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 TOP3BO95985 862 aaKnown RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 GZMAP12544 262 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 GRB10Q13322 594 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 BAATQ14032 418 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-201ENST00000299333 POU6F1Q14863 301 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF540Q8NDQ6 660 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 SLC9A7Q96T83 725 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 REEP1Q9H902 201 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 INVSQ9Y283 1065 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 CTSHP09668 335 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 PCSK1P29120 753 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 GP5P40197 560 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 GSTM5P46439 218 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 ADHFE1Q8IWW8 467 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 CKAP2Q8WWK9 683 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 AP4E1Q9UPM8 1137 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 SH3BP1Q9Y3L3 701 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 SPTLC1O15269 473 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 FOXO4P98177 505 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 PLCL1Q15111 1095 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 PTPAQ15257 358 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 NUDT18Q6ZVK8 323 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 HTRA1Q92743 480 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 POMKQ9H5K3 350 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
SCN3B-201ENST00000299333 A2ML1A8K2U0 1454 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms