RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 AP4E1Q9UPM8 1137 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CPQQ9Y646 472 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TAF1P21675 1872 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 A0A1B0GVM2 712 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TRIM43BA6NCK2 446 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TCAF2A6NFQ2 919 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TISP43B9A030 160 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 WNT7AO00755 349 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 BUB1O43683 1085 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DAB1O75553 588 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 GRAP2O75791 330 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PROSCO94903 275 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 GDI1P31150 447 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RABGGTBP53611 331 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SLC5A3P53794 718 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RPL26P61254 145 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 IRX5P78411 483 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 XIAPP98170 497 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DSC1Q08554 894 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PTP4A2Q12974 167 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 UGP2Q16851 508 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SLC8B1Q6J4K2 584 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZNF852Q6ZMS4 543 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RABEPKQ7Z6M1 372 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LINC00523Q86TU6 105 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZNF598Q86UK7 904 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 SPATA24Q86W54 205 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZNF280BQ86YH2 543 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SPPL3Q8TCT6 385 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 FNIP1Q8TF40 1166 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TMEM40Q8WWA1 233 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CASKIN2Q8WXE0 1202 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 OR8D1Q8WZ84 308 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 EDEM1Q92611 657 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TRIM43Q96BQ3 446 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 SHCBP1LQ9BZQ2 653 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DNAJC17Q9NVM6 304 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 NKIRAS1Q9NYS0 192 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SCHIP1Q9P0W5 487 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 WRAP73Q9P2S5 460 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 VTI1BQ9UEU0 232 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MAST2Q6P0Q8 1798 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MYBPHLA2RUH7 354 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CBX4O00257 560 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 KPNA3O00505 521 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 GRM6O15303 877 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 STX7O15400 261 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 MICAL2O94851 1124 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PRNPP04156 253 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CYP11A1P05108 521 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CNPP09543 421 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 RBP3P10745 1247 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CYP2A6P11509 494 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 GNSP15586 552 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 H2AFXP16104 143 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 PAX7P23759 505 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CCNCP24863 283 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 HTR1BP28222 390 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 WEE1P30291 646 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 GEMP55040 296 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DYNLT1P63172 113 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 IFT88Q13099 833 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CBLBQ13191 982 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TEAD4Q15561 434 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TRIP4Q15650 581 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 UPP1Q16831 310 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CLEC16AQ2KHT3 1053 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TCEAL5Q5H9L2 206 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 AARS2Q5JTZ9 985 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 EOGTQ5NDL2 527 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PAPD7Q5XG87 772 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 FBXL19Q6PCT2 694 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 NLRP9Q7RTR0 991 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZNF572Q7Z3I7 529 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 PHLDB2Q86SQ0 1253 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CCDC25Q86WR0 208 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LRRC8AQ8IWT6 810 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DHX40Q8IX18 779 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 CTAGE3PQ8IX95 158 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TBC1D19Q8N5T2 526 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SMG8Q8ND04 991 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 VN1R2Q8NFZ6 395 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RAB3IL1Q8TBN0 382 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 OSCP1Q8WVF1 389 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RNF25Q96BH1 459 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 TBATAQ96M53 351 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 NUDCD1Q96RS6 583 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SLC2A11Q9BYW1 496 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 UBE2ZQ9H832 354 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 FBRSQ9HAH7 460 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 METTL5Q9NRN9 209 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 RCOR3Q9P2K3 495 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 IRAK3Q9Y616 596 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PTPRJQ12913 1337 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SIGLEC16A6NMB1 481 aa3.18□□□□□ -1.9
HDX-201ENST00000297977 E5RJQ4 531 aa3.18□□□□□ -1.9
HDX-201ENST00000297977 M0QZQ0 153 aa3.18□□□□□ -1.9
HDX-201ENST00000297977 DFFAO00273 331 aa3.18□□□□□ -1.9
HDX-201ENST00000297977 LAMTOR5O43504 91 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms