RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 CEP57Q86XR8 500 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 TMPRSS6Q8IU80 811 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CRLF3Q8IUI8 442 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 APLFQ8IW19 511 aaPredicted RBP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 DEFB106AQ8N104 65 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 TMEM130Q8N3G9 435 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 KIF2BQ8N4N8 673 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 COLGALT1Q8NBJ5 622 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 GIMAP7Q8NHV1 300 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 RFWD2Q8NHY2 731 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CLEC4CQ8WTT0 213 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CFAP36Q96G28 342 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 P2RY11Q96G91 374 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CPNE1Q99829 537 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 MCMBPQ9BTE3 642 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 FAM49AQ9H0Q0 323 aaPredicted RBP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 LRRC4Q9HBW1 653 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 MRM3Q9HC36 420 aaKnown RBP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CSNK1G1Q9HCP0 422 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 WDR6Q9NNW5 1121 aaKnown RBP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CASS4Q9NQ75 786 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 NSMCE4AQ9NXX6 385 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 FNIP2Q9P278 1114 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 HEY2Q9UBP5 337 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 DNAJB4Q9UDY4 337 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 GGT7Q9UJ14 662 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 MID2Q9UJV3 735 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 CDH9Q9ULB4 789 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 PIN4Q9Y237 131 aaKnown RBP6.78□□□□□ -1.32
DEFB1-201ENST00000297439 IPPQ9Y573 584 aa6.78□□□□□ -1.32
DEFB1-201ENST00000297439 FAM237BA0A1B0GVD1 139 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ARHGEF37A1IGU5 675 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 C17orf102A2RUQ5 167 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FCHO1O14526 889 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 INPPL1O15357 1258 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 GSC2O15499 205 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 H2AFYO75367 372 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 USP1O94782 785 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ALDOAP04075 364 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 CYP11A1P05108 521 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 SERPINE1P05121 402 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 APOA4P06727 396 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 POLBP06746 335 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 MYL2P10916 166 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 LCP1P13796 627 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 BGNP21810 368 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 AMPD1P23109 780 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 LMO2P25791 158 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 PCSK1P29120 753 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ADORA2BP29275 332 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 SERPINB3P29508 390 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 HOXC13P31276 330 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 POLD2P49005 469 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 NPY2RP49146 381 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 HARS2P49590 506 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 CXCR3P49682 368 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 LIMK2P53671 638 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 TMPRSS15P98073 1019 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 DEUP1Q05D60 604 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ADIGQ0VDE8 80 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 EIF4EBP2Q13542 120 aaPredicted RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 CCDC153Q494R4 210 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 DNAL1Q4LDG9 190 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 GLRA4Q5JXX5 417 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 ITPRIPL1Q6GPH6 555 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 PM20D1Q6GTS8 502 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 TRMT10BQ6PF06 316 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FAM43BQ6ZT52 329 aaPredicted RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 MRPL10Q7Z7H8 261 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FAM35AQ86V20 835 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 OSTM1Q86WC4 334 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 NUDCD3Q8IVD9 361 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 WDR75Q8IWA0 830 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 NDUFAF2Q8N183 169 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 SIX6OS1Q8N1H7 587 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 TEX9Q8N6V9 391 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 RDH11Q8TC12 318 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 DEPDC1BQ8WUY9 529 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 NSMCE1Q8WV22 266 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 TMEM40Q8WWA1 233 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 FATE1Q969F0 183 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 CERS2Q96G23 380 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 TSGA13Q96PP4 275 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
DEFB1-201ENST00000297439 MIPEPQ99797 713 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 OSBPL2Q9H1P3 480 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 GBA3Q9H227 469 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 CXCL16Q9H2A7 254 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 PRDM12Q9H4Q4 367 aa6.77□□□□□ -1.33
DEFB1-201ENST00000297439 LRRC40Q9H9A6 602 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms