RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 DDI1Q8WTU0 396 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 TSC1Q92574 1164 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 RNF25Q96BH1 459 aaPredicted RBP28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 BBS2Q9BXC9 721 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 CALN1Q9BXU9 219 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 PLK2Q9NYY3 685 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 MPP6Q9NZW5 540 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 MARK1Q9P0L2 795 aa28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 PPARGC1AQ9UBK2 798 aaKnown RBP28.61■■■□□ 2.17
CHCHD4-201ENST00000295767 NARSO43776 548 aaKnown RBP28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 TBL1XO60907 577 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 CYBBP04839 570 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 HOXC13P31276 330 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 ARL4AP40617 200 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 ANO4Q32M45 955 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 RWDD4Q6NW29 188 aaKnown RBP28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 CPA6Q8N4T0 437 aa28.6■■■□□ 2.17
CHCHD4-201ENST00000295767 NEDD8-MDP1E9PL57 170 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 H3BRJ5 948 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 CNTN5O94779 1100 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ADH1CP00326 375 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ADH5P11766 374 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 IL4RP24394 825 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 HOXD9P28356 352 aaPredicted RBP28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 EPHB2P29323 1055 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ZNF135P52742 658 aaPredicted RBP28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ALFQ53S48 1182 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ODF2Q5BJF6 829 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 RFX8Q6ZV50 586 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 NYAP1Q6ZVC0 841 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 MAP7D3Q8IWC1 876 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 EXD1Q8NHP7 514 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 TTC8Q8TAM2 541 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 ZYG11BQ9C0D3 744 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 STIM2Q9P246 746 aa28.59■■■□□ 2.17
CHCHD4-201ENST00000295767 TYW5A2RUC4 315 aaKnown RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 ZRANB2O95218 330 aaKnown RBP eCLIP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 PENKP01210 267 aaPredicted RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 HTR7P34969 479 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 TTC39BQ5VTQ0 682 aaPredicted RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 DCAF12L1Q5VU92 463 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 MFSD7Q6UXD7 560 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 CSPG4P5Q96PW8 444 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 ZNF670Q9BS34 389 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 RCOR3Q9P2K3 495 aaPredicted RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 ATP1A1P05023 1023 aaKnown RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 TYRP14679 529 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 HCAR3P49019 387 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 GAD2Q05329 585 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 ITPRIPL2Q3MIP1 535 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 MPP7Q5T2T1 576 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 ANKS1BQ7Z6G8 1248 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 RCOR2Q8IZ40 523 aa28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 RBM41Q96IZ5 413 aaKnown RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 C16orf45Q96MC5 204 aaPredicted RBP28.58■■■□□ 2.17
CHCHD4-201ENST00000295767 A0A1B0GVM2 712 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 TCAF2A6NFQ2 919 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 HOXC11O43248 304 aaPredicted RBP28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 SRFP11831 508 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 DPYSQ14117 519 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 GAB4Q2WGN9 574 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 RNF135Q8IUD6 432 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 CCDC50Q8IVM0 306 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 CSGALNACT1Q8TDX6 532 aa28.57■■■□□ 2.16
CHCHD4-201ENST00000295767 FANCGO15287 622 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 CDKN2BP42772 138 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 ETF1P62495 437 aaKnown RBP28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 NR1H3Q13133 447 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 ZNF211Q13398 564 aaPredicted RBP28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 ANKRD20A8PQ5CZ79 823 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 RNF43Q68DV7 783 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 SPOCD1Q6ZMY3 1216 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 TFAP2DQ7Z6R9 452 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 VSIG1Q86XK7 387 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 FAF2Q96CS3 445 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 PSMB7Q99436 277 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 CD320Q9NPF0 282 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 TRPV5Q9NQA5 729 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 ARHGEF4Q9NR80 690 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 DUSP12Q9UNI6 340 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 SORCS3Q9UPU3 1222 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 CHD5Q8TDI0 1954 aa28.56■■■□□ 2.16
CHCHD4-201ENST00000295767 NUP205Q92621 2012 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 DAPK3O43293 454 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 PYGMP11217 842 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 RHOQP17081 205 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 AMPD1P23109 780 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 CDH4P55283 916 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 TJAP1Q5JTD0 557 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 AADACL2Q6P093 401 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 CHST9Q7L1S5 443 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 NLRP14Q86W24 1093 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 DNASE1L2Q92874 299 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 NECAB3Q96P71 396 aaPredicted RBP28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 CATSPERBQ9H7T0 1116 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 ZNF212Q9UDV6 495 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 CLEC4EQ9ULY5 219 aa28.55■■■□□ 2.16
CHCHD4-201ENST00000295767 ZNF487B1APH4 448 aa28.54■■■□□ 2.16
CHCHD4-201ENST00000295767 FGF10O15520 208 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms