RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 KRT10P13645 584 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 NUMBP49757 651 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 PIGHQ14442 188 aaPredicted RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 BTBD8Q5XKL5 378 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TXNDC8Q6A555 127 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TMC5Q6UXY8 1006 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 FNIP1Q8TF40 1166 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 CENPIQ92674 756 aaPredicted RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 HEMGNQ9BXL5 484 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 LRRC3Q9BY71 257 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TLE6Q9H808 572 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 MCM8Q9UJA3 840 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ZNF840PA6NDX5 716 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM72CH0Y354 149 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 DPYSL4O14531 572 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 TTC4O95801 387 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 NOS2P35228 1153 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ELF3P78545 371 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 DLX2Q07687 328 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 TCEAL5Q5H9L2 206 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM72AQ5TYM5 149 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM72DQ6L9T8 149 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM72BQ86X60 149 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 CCDC33Q8N5R6 958 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 CCHCR1Q8TD31 782 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 LRRN4Q8WUT4 740 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 CKAP2Q8WWK9 683 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 PRMT1Q99873 361 aaKnown RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SNRNP25Q9BV90 132 aaKnown RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 FBXO44Q9H4M3 255 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 GKN1Q9NS71 199 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 MFHAS1Q9Y4C4 1052 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 C2orf16Q68DN1 1984 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 COCHO43405 550 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 TLR5O60602 858 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ZDHHC11BP0C7U3 371 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 PTPN9P43378 593 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 KCNQ1P51787 676 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 EPHB3P54753 998 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 HYAL1Q12794 435 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 KLF1Q13351 362 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 C10orf120Q5SQS8 335 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 UBAP2Q5T6F2 1119 aaKnown RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 MFSD7Q6UXD7 560 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 Q7L0L9 218 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 MON1AQ86VX9 555 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 CCDC63Q8NA47 563 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ZNF707Q96C28 371 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SMPD4Q9NXE4 827 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 EURLQ9NYK6 297 aa11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 DNMT3BQ9UBC3 853 aaKnown RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 SAE1Q9UBE0 346 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 USP15Q9Y4E8 981 aaPredicted RBP11.84□□□□□ -0.51
CHRNB3-201ENST00000289957 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 NDC80O14777 642 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 MAP3K6O95382 1288 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 LRG1P02750 347 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 ALADP13716 330 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 GABRR2P28476 465 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 SCNN1AP37088 669 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 SNX16P57768 344 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 DEUP1Q05D60 604 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 TAF12Q16514 161 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 KAZNQ674X7 775 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 GRASPQ7Z6J2 395 aaPredicted RBP11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 GPR65Q8IYL9 337 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 KATNAL2Q8IYT4 538 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 ING5Q8WYH8 240 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 IRGQQ8WZA9 623 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 ARHGEF2Q92974 986 aaKnown RBP11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 MYEOVQ96EZ4 313 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 ABCC13Q9NSE7 274 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 ASIC3Q9UHC3 531 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 SSX2IPQ9Y2D8 614 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 RNF8O76064 485 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 SUN1O94901 812 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
CHRNB3-201ENST00000289957 F11P03951 625 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms