RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 POPDC2Q9HBU9 364 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 KIAA1522Q9P206 1035 aaPredicted RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 PCOLCE2Q9UKZ9 415 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 NAALADL1Q9UQQ1 740 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 FNDC3AQ9Y2H6 1198 aaKnown RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 PCDHGB2Q9Y5G2 931 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 CACNA1EQ15878 2313 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 PPP1R3GB7ZBB8 358 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 F5H5T6 163 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 LUC7L3O95232 432 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 SRPRAP08240 638 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 SLC2A3P11169 496 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 ABCB4P21439 1286 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 CD27P26842 260 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 GPD2P43304 727 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 GRIA4P48058 902 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 CCT8P50990 548 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 SNX16P57768 344 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 MEA1Q16626 185 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 HNRNPA1L2Q32P51 320 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 MS4A13Q5J8X5 152 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 NADSYN1Q6IA69 706 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 DENND1BQ6P3S1 775 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 USP30Q70CQ3 517 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 TAC4Q86UU9 113 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 DHX40Q8IX18 779 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 CFAP52Q8N1V2 620 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 PNPLA1Q8N8W4 532 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 LMO3Q8TAP4 145 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 STK32AQ8WU08 396 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 ADAMTS14Q8WXS8 1223 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 TTC17Q96AE7 1141 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 BIRC7Q96CA5 298 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 BTN2A3PQ96KV6 586 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 NOX5Q96PH1 765 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 PPP1R9BQ96SB3 815 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 ZSWIM1Q9BR11 485 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 TMEM121BQ9BXQ6 578 aaPredicted RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 ACE2Q9BYF1 805 aaPredicted RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 NUCKS1Q9H1E3 243 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 RSPH9Q9H1X1 276 aaPredicted RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 PABPC3Q9H361 631 aaKnown RBP14.54□□□□□ -0.08
TPM1-202ENST00000288398 IL21RQ9HBE5 538 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 TM9SF3Q9HD45 589 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 OSGEPQ9NPF4 335 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 ANKRD6Q9Y2G4 727 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 CKAP5Q14008 2032 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 IGF2RP11717 2491 aa14.54□□□□□ -0.08
TPM1-202ENST00000288398 EDDM13A0A1B0GTR0 161 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 TARSL2A2RTX5 802 aaKnown RBP14.53□□□□□ -0.08
TPM1-202ENST00000288398 GOLGA8CPA6NN73 597 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 E5RJQ4 531 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 SIN3BO75182 1162 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 RNASEH2AO75792 299 aaKnown RBP14.53□□□□□ -0.08
TPM1-202ENST00000288398 GABBR2O75899 941 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 OXCT1P55809 520 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 MARSP56192 900 aaKnown RBP14.53□□□□□ -0.08
TPM1-202ENST00000288398 YWHAZP63104 245 aaKnown RBP14.53□□□□□ -0.08
TPM1-202ENST00000288398 CDK17Q00537 523 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 ECT2LQ008S8 904 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 CST6Q15828 149 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 TPD52L1Q16890 204 aaPredicted RBP14.53□□□□□ -0.08
TPM1-202ENST00000288398 KIF19Q2TAC6 998 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 DCAF6Q58WW2 860 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 RABGAP1LQ5R372 815 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 RAP1GAP2Q684P5 730 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 KIAA0895LQ68EN5 471 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 BEND5Q7L4P6 421 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 GLRX5Q86SX6 157 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 KDM1BQ8NB78 822 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 IGSF8Q969P0 613 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 KREMEN1Q96MU8 473 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 THAP9Q9H5L6 903 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 SYNCQ9H7C4 482 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 ERVW-1Q9UQF0 538 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 SNX11Q9Y5W9 270 aa14.53□□□□□ -0.08
TPM1-202ENST00000288398 CHD6Q8TD26 2715 aa14.52□□□□□ -0.08
TPM1-202ENST00000288398 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 PCNX2A6NKB5 2137 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 SRRM3A6NNA2 597 aaPredicted RBP14.52□□□□□ -0.09
TPM1-202ENST00000288398 DFNA5O60443 496 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 TRUB2O95900 331 aaKnown RBP14.52□□□□□ -0.09
TPM1-202ENST00000288398 TACR2P21452 398 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 GRK6P43250 576 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 PSMD8P48556 350 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 MTA1Q13330 715 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 SLC12A1Q13621 1099 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 ARHGAP44Q17R89 818 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 SLC45A4Q5BKX6 768 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 ZC3H12AQ5D1E8 599 aaKnown RBP14.52□□□□□ -0.09
TPM1-202ENST00000288398 TTC39BQ5VTQ0 682 aaPredicted RBP14.52□□□□□ -0.09
TPM1-202ENST00000288398 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 MMAAQ8IVH4 418 aaKnown RBP14.52□□□□□ -0.09
TPM1-202ENST00000288398 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 SLC39A13Q96H72 371 aa14.52□□□□□ -0.09
TPM1-202ENST00000288398 AASDHPPTQ9NRN7 309 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms