RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RHOCP08134 193 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 H2AFZP0C0S5 128 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SP9P0CG40 484 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 HOXB2P14652 356 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 POLR2EP19388 210 aaKnown RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 NTSR1P30989 418 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CSKP41240 450 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 FNTBP49356 437 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 IRAK1P51617 712 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 DGKEP52429 567 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 GALCP54803 685 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 HDAC4P56524 1084 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 ST8SIA6P61647 398 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 OGDHQ02218 1023 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 TCF15Q12870 199 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 LMAN2Q12907 356 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 STARD3Q14849 445 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 EIF4HQ15056 248 aaKnown RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 SPA17Q15506 151 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SLC18A3Q16572 532 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PITRM1Q5JRX3 1037 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 MPP7Q5T2T1 576 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PLEKHA7Q6IQ23 1121 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SERPINA13PQ6UXR4 307 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 H2AFVQ71UI9 128 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SYT13Q7L8C5 426 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SLFN11Q7Z7L1 901 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 C14orf80Q86SX3 495 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CCAR2Q8N163 923 aaKnown RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 PHTF2Q8N3S3 785 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 IL17RCQ8NAC3 791 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 WFDC5Q8TCV5 224 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 WFIKKN2Q8TEU8 576 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CYB5D2Q8WUJ1 264 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 HMGB4Q8WW32 186 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SORCS1Q8WY21 1168 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 IGSF8Q969P0 613 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 NT5C3BQ969T7 300 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 P2RY11Q96G91 374 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CHP1Q99653 195 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PACSIN1Q9BY11 444 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 TPSD1Q9BZJ3 242 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 TRIM7Q9C029 511 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 ISCUQ9H1K1 167 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 KCNH6Q9H252 994 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 ZWILCHQ9H900 591 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 ANLNQ9NQW6 1124 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PRMT8Q9NR22 394 aaPredicted RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 TMEM51Q9NW97 253 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 GPATCH2LQ9NWQ4 482 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 C2orf42Q9NWW7 574 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 MPP6Q9NZW5 540 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 PCSK1NQ9UHG2 260 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 VPS28Q9UK41 221 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 FBXO4Q9UKT5 387 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 MMP17Q9ULZ9 603 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PLA2G4CQ9UP65 541 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SLC27A6Q9Y2P4 619 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 RAD54BQ9Y620 910 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SSU72P8A0A1W2PR75 194 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TCRBV5S1A1TA0A578 114 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TMEM191CA6NGB0 347 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 DAPK3O43293 454 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CLDN11O75508 207 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CNTN5O94779 1100 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 EPHX1P07099 455 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CISD3P0C7P0 127 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 HLA-EP13747 358 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 OR1E1P30953 314 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 HNRNPH3P31942 346 aaKnown RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 ADRA1BP35368 520 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CYLC1P35663 651 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 NNMTP40261 264 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 KIR2DL1P43626 348 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 NRLP54845 237 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CDH4P55283 916 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 OXCT1P55809 520 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TPI1P60174 286 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 DMWDQ09019 674 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TBX2Q13207 712 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 EIF4EBP2Q13542 120 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 ZNF234Q14588 700 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 E2F5Q15329 346 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CRY1Q16526 586 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 LPAL2Q16609 132 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 FUT11Q495W5 492 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 HSF5Q4G112 596 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 PPP6R3Q5H9R7 873 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 FSCBQ5H9T9 825 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 PPP1R15BQ5SWA1 713 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 C6orf118Q5T5N4 469 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 ACBD5Q5T8D3 534 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 DAB2IPQ5VWQ8 1189 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 KIAA1324Q6UXG2 1013 aaKnown RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 PRR23BQ6ZRT6 265 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 CEP68Q76N32 757 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms