RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GPR17Q13304 367 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ARTNQ5T4W7 220 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MSANTD2Q6P1R3 559 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 C6orf89Q6UWU4 347 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 UNC5AQ6ZN44 842 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MICALCLQ6ZW33 695 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ANKRD33Q7Z3H0 272 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 PIGWQ7Z7B1 504 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 TAX1BP1Q86VP1 789 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 C4orf33Q8N1A6 199 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ARHGAP18Q8N392 663 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MPP5Q8N3R9 675 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 STKLD1Q8NE28 680 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 GDAP1Q8TB36 358 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MRPL9Q9BYD2 267 aaKnown RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 HIPK3Q9H422 1215 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MLXIPLQ9NP71 852 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 SMG5Q9UPR3 1016 aaKnown RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 PCDHA11Q9Y5I1 949 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 FAM169AQ9Y6X4 670 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 IQANK1A0A1B0GTG1 560 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 FAM92AA1XBS5 289 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CXorf49A8MYA2 514 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TCP11X1B4DZS4 312 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 H7C4K7 107 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 ZBTB24O43167 697 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MSI1O43347 362 aaKnown RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TYROBPO43914 113 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 PARNO95453 639 aaKnown RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 ASMTLO95671 621 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 INHBAP08476 426 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MLLT6P55198 1093 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 FAAP100Q0VG06 881 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MANEALQ5VSG8 457 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 GKAP1Q5VSY0 366 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 RWDD4Q6NW29 188 aaKnown RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CYS1Q717R9 158 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TAS1R1Q7RTX1 841 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SRLQ86TD4 932 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TTC9BQ8N6N2 239 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SPPL2BQ8TCT7 592 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 DEPDC1BQ8WUY9 529 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SLC39A13Q96H72 371 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 FCRL2Q96LA5 508 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MAGEB18Q96M61 343 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 KLHL8Q9P2G9 620 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TRHDEQ9UKU6 1024 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 NEU3Q9UQ49 428 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 RRP15Q9Y3B9 282 aaKnown RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MAD1L1Q9Y6D9 718 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 IKBKGQ9Y6K9 419 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MTMR11A4FU01 709 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MT-ND3P03897 115 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CPB1P15086 417 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 KRT4P19013 534 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 YWHAQP27348 245 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 HOXC13P31276 330 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 RPA3P35244 121 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 COG7P83436 770 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 IL9RQ01113 521 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 NRG1Q02297 640 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF33AQ06730 810 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SMARCB1Q12824 385 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TEX44Q53QW1 395 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 RTP2Q5QGT7 225 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SLC26A11Q86WA9 606 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 LRRC6Q86X45 466 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CACNA2D3Q8IZS8 1091 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 LZTR1Q8N653 840 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 PPM1NQ8N819 430 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 ZSCAN18Q8TBC5 510 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 DPF3Q92784 378 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TBC1D31Q96DN5 1066 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 STAMBPL1Q96FJ0 436 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CELF6Q96J87 481 aaKnown RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SPATA17Q96L03 361 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 C1orf74Q96LT6 269 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SERPINB11Q96P15 392 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TSGA13Q96PP4 275 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 VAT1Q99536 393 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 OXCT2Q9BYC2 517 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-201ENST00000276573 SMYD2Q9NRG4 433 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 MOCS1Q9NZB8 636 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 GMIPQ9P107 970 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF180Q9UJW8 692 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TLR6Q9Y2C9 796 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 TTC3P53804 2025 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 CENPFP49454 3210 aa9.84□□□□□ -0.83
TRIM55-201ENST00000276573 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 WDR27A2RRH5 827 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 FAM159BA6NKW6 160 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 FGF10O15520 208 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 RTN3O95197 1032 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 VNN2O95498 520 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 JCHAINP01591 159 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 HAPLN1P10915 354 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SLC2A3P11169 496 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms