RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SAAL1Q96ER3 474 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 SPATA17Q96L03 361 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 FCRL2Q96LA5 508 aaPredicted RBP10.31□□□□□ -0.76
LRTM1-201ENST00000273286 PKMYT1Q99640 499 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 SGPP1Q9BX95 441 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 CUEDC2Q9H467 287 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 ECT2Q9H8V3 914 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 VPS45Q9NRW7 570 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 TMLHEQ9NVH6 421 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 DUS2Q9NX74 493 aaKnown RBP10.31□□□□□ -0.76
LRTM1-201ENST00000273286 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
LRTM1-201ENST00000273286 GTF3C4Q9UKN8 822 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 CDH9Q9ULB4 789 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 SNX9Q9Y5X1 595 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 OBSL1O75147 1896 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 ZNF233A6NK53 670 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 RHOBTB1O94844 696 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 APBB3O95704 486 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 TNNC2P02585 160 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 CYP2F1P24903 491 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 CUL4AQ13619 759 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 ZNF77Q15935 545 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 DDR2Q16832 855 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 TRIM68Q6AZZ1 485 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 FAM171BQ6P995 826 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 CXorf38Q8TB03 319 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 ARRDC1-AS1Q9H2J1 176 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 ZSCAN16Q9H4T2 348 aaPredicted RBP10.3□□□□□ -0.76
LRTM1-201ENST00000273286 CRTAC1Q9NQ79 661 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 PANK4Q9NVE7 773 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 MAGEC2Q9UBF1 373 aaPredicted RBP10.3□□□□□ -0.76
LRTM1-201ENST00000273286 ARHGAP26Q9UNA1 814 aa10.3□□□□□ -0.76
LRTM1-201ENST00000273286 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 OTOL1A6NHN0 477 aaPredicted RBP10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SLC9A3R1O14745 358 aaPredicted RBP10.29□□□□□ -0.76
LRTM1-201ENST00000273286 EGFP01133 1207 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 HDCP19113 662 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 ANXA13P27216 316 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 MPLP40238 635 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SNRPFP62306 86 aaKnown RBP10.29□□□□□ -0.76
LRTM1-201ENST00000273286 AMPD3Q01432 767 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SLC39A14Q15043 492 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 HSF5Q4G112 596 aaPredicted RBP10.29□□□□□ -0.76
LRTM1-201ENST00000273286 DENND5BQ6ZUT9 1274 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 USP49Q70CQ1 688 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 SYT15Q9BQS2 421 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 CBWD1Q9BRT8 395 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 MTMR12Q9C0I1 747 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 TNMDQ9H2S6 317 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 PDE11AQ9HCR9 933 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 TRPC7Q9HCX4 862 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 GCM1Q9NP62 436 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 INTS13Q9NVM9 706 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 C2orf42Q9NWW7 574 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 TBC1D7Q9P0N9 293 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 ANGPTL2Q9UKU9 493 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 GPR55Q9Y2T6 319 aaPredicted RBP10.29□□□□□ -0.76
LRTM1-201ENST00000273286 CLIC4Q9Y696 253 aa10.29□□□□□ -0.76
LRTM1-201ENST00000273286 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 TADA3O75528 432 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 ARSAP15289 507 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 ACAT1P24752 427 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 EIF2DP41214 584 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 CTSKP43235 329 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 GPR15P49685 360 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 CASP5P51878 434 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 NOP14P78316 857 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 AUHQ13825 339 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 DMC1Q14565 340 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 PLK5Q496M5 336 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 USP39Q53GS9 565 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 PKN3Q6P5Z2 889 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 LIMS2Q7Z4I7 341 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 DDX42Q86XP3 938 aaKnown RBP eCLIP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 SCN4BQ8IWT1 228 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 RPLP0P6Q8NHW5 317 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 CHFRQ96EP1 664 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 HPDLQ96IR7 371 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 TTLL2Q9BWV7 592 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 GCNT4Q9P109 453 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 TNFRSF10DQ9UBN6 386 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 SUCOQ9UBS9 1254 aaKnown RBP10.28□□□□□ -0.76
LRTM1-201ENST00000273286 SIX4Q9UIU6 781 aa10.28□□□□□ -0.76
LRTM1-201ENST00000273286 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.76
LRTM1-201ENST00000273286 GOLGA8IPA6NC78 632 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 GOLGA8JA6NMD2 632 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 TACC1O75410 805 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 PRPF6O94906 941 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 SYT1P21579 422 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 WARSP23381 471 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 DPP6P42658 865 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms