RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CYP26A1O43174 497 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 GLRA3O75311 464 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 SNX4O95219 450 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 AXLP30530 894 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ZFP28Q8NHY6 868 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 SYN2Q92777 582 aaPredicted RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 USP7Q93009 1102 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 MRPS33Q9Y291 106 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 TNS3Q68CZ2 1445 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 COX7A2P14406 83 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 NAMPTP43490 491 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 RPS6KA3P51812 740 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 NR1D2Q14995 579 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 C3orf62Q6ZUJ4 267 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 C2CD2Q9Y426 696 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 AGBL2Q5U5Z8 902 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 CHCHD6Q9BRQ6 235 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 RIOK2Q9BVS4 552 aaKnown RBP13.52□□□□□ -0.24
PRDM16-201ENST00000270722 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 OGTO15294 1046 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 PLA2G6O60733 806 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 SEC24BO95487 1268 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 PDCD4Q53EL6 469 aaKnown RBP13.52□□□□□ -0.24
PRDM16-201ENST00000270722 SUSD6Q92537 303 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.24
PRDM16-201ENST00000270722 TRPC4Q9UBN4 977 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 RPS6KL1Q9Y6S9 549 aa13.52□□□□□ -0.24
PRDM16-201ENST00000270722 KLRC2P26717 231 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 DDX39BQ13838 428 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 TRMT5Q32P41 509 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 SLFN11Q7Z7L1 901 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 EXOC3L1Q86VI1 746 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 RASGEF1AQ8N9B8 481 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 AGR3Q8TD06 166 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF221Q9UK13 617 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 SGTAO43765 313 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 MED24O75448 989 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF786Q8N393 782 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 LSM14AQ8ND56 463 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 ANKRD7Q92527 254 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 TMEM143Q96AN5 459 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 PNMA8BQ9ULN7 279 aaPredicted RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 TCP11X1B4DZS4 312 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 CD3EAPO15446 510 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 THRAP10827 490 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 NQO1P15559 274 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF12P17014 697 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 GPR1P46091 355 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 PSMD4P55036 377 aaKnown RBP13.52□□□□□ -0.25
PRDM16-201ENST00000270722 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 FNIP1Q8TF40 1166 aa13.52□□□□□ -0.25
PRDM16-201ENST00000270722 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.256e-6■□□□□ 10.5
PRDM16-201ENST00000270722 CCR1P32246 355 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ACOT2P49753 483 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SCARF1Q14162 830 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SETD9Q8NE22 299 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF304Q9HCX3 659 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PCMTD2Q9NV79 361 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PMPCBO75439 489 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 GRAP2O75791 330 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 GPR15P49685 360 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 C1orf54Q8WWF1 131 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 RGL4Q8IZJ4 473 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 KCNS3Q9BQ31 491 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 MXRA8Q9BRK3 442 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PRKAG3Q9UGI9 489 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 UBE2QL1A1L167 161 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 KELP23276 732 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PPM1AP35813 382 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 CAMK1Q14012 370 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF846Q147U1 533 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 FAM220AQ7Z4H9 259 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SERPINB11Q96P15 392 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 MTG1Q9BT17 334 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 RGS7P49802 495 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 TRAF3Q13114 568 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SLC25A41Q8N5S1 370 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms