RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 NEMP1O14524 444 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 HSPA4LO95757 839 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 HARS2P49590 506 aaKnown RBP28.19■■■□□ 2.1
CBX4-201ENST00000269397 DLG2Q15700 870 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 MICALL2Q8IY33 904 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 C7orf31Q8N865 590 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 COPS5Q92905 334 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 CXCL16Q9H2A7 254 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 ATICP31939 592 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 PHKA2P46019 1235 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 INCA1Q0VD86 236 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 DPYSL2Q16555 572 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 DBN1Q16643 649 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 C4orf22Q6V702 233 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 RNF148Q8N7C7 305 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 OPTNQ96CV9 577 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 WDR55Q9H6Y2 383 aaPredicted RBP28.19■■■□□ 2.1
CBX4-201ENST00000269397 TMPRSS4Q9NRS4 437 aa28.19■■■□□ 2.1
CBX4-201ENST00000269397 A0A0A0MRY4 1105 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 MYOCOSA0A1B0GUC4 107 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DGKIO75912 1065 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 PSMB4P28070 264 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 FDFT1P37268 417 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 NUDT2P50583 147 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 IRF9Q00978 393 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 MAP3K21Q5TCX8 1036 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DCAF15Q66K64 600 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 ADAM32Q8TC27 787 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 SPATA13Q96N96 652 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 RNF19AQ9NV58 838 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 SSX2IPQ9Y2D8 614 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 RPS6KL1Q9Y6S9 549 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 USP12O75317 370 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 ALOX15P16050 662 aaPredicted RBP28.18■■■□□ 2.1
CBX4-201ENST00000269397 PMLP29590 882 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 GK3PQ14409 553 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DCLK2Q8N568 766 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DCUN1D1Q96GG9 259 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DPP3Q9NY33 737 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 UBAP1Q9NZ09 502 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 NME7Q9Y5B8 376 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 DOCK1Q14185 1865 aa28.18■■■□□ 2.1
CBX4-201ENST00000269397 PGAM1P18669 254 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 AMHR2Q16671 573 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 SDCCAG8Q86SQ7 713 aaPredicted RBP28.17■■■□□ 2.1
CBX4-201ENST00000269397 MPP4Q96JB8 637 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 DNAJC1Q96KC8 554 aaKnown RBP28.17■■■□□ 2.1
CBX4-201ENST00000269397 MORF4L1Q9UBU8 362 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 A0A087WZ62 844 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 C19orf81C9J6K1 198 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 RNF103O00237 685 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 SMIM18P0DKX4 95 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 MX2P20592 715 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 CCR10P46092 362 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 PGGT1BP53609 377 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 MRPS22P82650 360 aaKnown RBP28.17■■■□□ 2.1
CBX4-201ENST00000269397 LRRC8BQ6P9F7 803 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 EPGNQ6UW88 154 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 CYS1Q717R9 158 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 CHST13Q8NET6 341 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 FCRL3Q96P31 734 aaPredicted RBP28.17■■■□□ 2.1
CBX4-201ENST00000269397 FDXACB1Q9BRP7 624 aaPredicted RBP28.17■■■□□ 2.1
CBX4-201ENST00000269397 CDH19Q9H159 772 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 GGA3Q9NZ52 723 aa28.17■■■□□ 2.1
CBX4-201ENST00000269397 MFSD11O43934 449 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 AMHP03971 560 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 MYL4P12829 197 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 LCP1P13796 627 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 SOWAHAQ2M3V2 549 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 FAM131BQ86XD5 332 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 PQLC1Q8N2U9 271 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 SLC4A5Q9BY07 1137 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 VRTNQ9H8Y1 702 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 SNX9Q9Y5X1 595 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 PPEF2O14830 753 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 CASQ2O14958 399 aaPredicted RBP28.16■■■□□ 2.1
CBX4-201ENST00000269397 PGK2P07205 417 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 PIM1P11309 404 aaPredicted RBP28.16■■■□□ 2.1
CBX4-201ENST00000269397 RANBP1P43487 201 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 XIAPP98170 497 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 SNAPC2Q13487 334 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 OGFRL1Q5TC84 451 aaPredicted RBP28.16■■■□□ 2.1
CBX4-201ENST00000269397 TP53INP2Q8IXH6 220 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 CCNYQ8ND76 341 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 AGAP3Q96P47 875 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 KCNK16Q96T55 309 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 AGAP2Q99490 1192 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 PDZD7Q9H5P4 517 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 PCDHB12Q9Y5F1 795 aa28.16■■■□□ 2.1
CBX4-201ENST00000269397 SYNJ2BP-COX16A0A087WUM0 186 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 CCDC160A6NGH7 325 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 GAS2O43903 313 aaKnown RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 PYGLP06737 847 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 ATP6V1B1P15313 513 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 NR2C2P49116 596 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 TREML2Q5T2D2 321 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 TMEM110Q86TL2 294 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 SLC35F5Q8WV83 523 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 SPATA33Q96N06 139 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 COX16Q9P0S2 106 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms