RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 CDKL3Q8IVW4 592 aaPredicted RBP19.59■□□□□ 0.73
CPNE7-201ENST00000268720 B3GALNT2Q8NCR0 500 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 GCATO75600 419 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 SPAG6O75602 509 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 PSMB4P28070 264 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 AFF1P51825 1210 aaKnown RBP19.59■□□□□ 0.73
CPNE7-201ENST00000268720 EPHB1P54762 984 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 SNX16P57768 344 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 KRT72Q14CN4 511 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 N4BP2L1Q5TBK1 243 aaPredicted RBP19.59■□□□□ 0.73
CPNE7-201ENST00000268720 SYPL2Q5VXT5 272 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 HEATR6Q6AI08 1181 aaKnown RBP19.59■□□□□ 0.73
CPNE7-201ENST00000268720 HFE2Q6ZVN8 426 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 PAQR9Q6ZVX9 377 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 SH3TC2Q8TF17 1288 aa19.59■□□□□ 0.73
CPNE7-201ENST00000268720 PARK7Q99497 189 aaKnown RBP19.59■□□□□ 0.73
CPNE7-201ENST00000268720 HUS1O60921 280 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 C6orf222P0C671 652 aaPredicted RBP19.58■□□□□ 0.73
CPNE7-201ENST00000268720 UBTFL6P0CB48 400 aaPredicted RBP19.58■□□□□ 0.73
CPNE7-201ENST00000268720 SP100P23497 879 aaPredicted RBP19.58■□□□□ 0.73
CPNE7-201ENST00000268720 PRKCHP24723 683 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 MATKP42679 507 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 SULT1E1P49888 294 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 MRPS35P82673 323 aaKnown RBP19.58■□□□□ 0.73
CPNE7-201ENST00000268720 FASTKD1Q53R41 847 aaKnown RBP19.58■□□□□ 0.73
CPNE7-201ENST00000268720 KIAA0319Q5VV43 1072 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.58■□□□□ 0.736e-7■■■□□ 18.7
CPNE7-201ENST00000268720 CFAP61Q8NHU2 1237 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 TUBB6Q9BUF5 446 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 KRT82Q9NSB4 513 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 DNAJC16Q9Y2G8 782 aa19.58■□□□□ 0.73
CPNE7-201ENST00000268720 PTGESO14684 152 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 SMIM24O75264 130 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 ALDOAP04075 364 aaKnown RBP19.58■□□□□ 0.72
CPNE7-201ENST00000268720 ZNF865P0CJ78 1059 aaPredicted RBP19.58■□□□□ 0.72
CPNE7-201ENST00000268720 KCNE1P15382 129 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 CDC42EP1Q00587 391 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 SPRYD7Q5W111 196 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 WSCD1Q658N2 575 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 SMC1BQ8NDV3 1235 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 STKLD1Q8NE28 680 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 GSTCDQ8NEC7 633 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 ACVR1CQ8NER5 493 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 HSFY1Q96LI6 401 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 ZNF560Q96MR9 790 aa19.58■□□□□ 0.72
CPNE7-201ENST00000268720 QKIQ96PU8 341 aaKnown RBP eCLIP19.58■□□□□ 0.72
CPNE7-201ENST00000268720 RPL26L1Q9UNX3 145 aaKnown RBP19.58■□□□□ 0.72
CPNE7-201ENST00000268720 FAM72CH0Y354 149 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
CPNE7-201ENST00000268720 MYL3P08590 195 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 TPH1P17752 444 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 MSX2P35548 267 aaPredicted RBP19.57■□□□□ 0.72
CPNE7-201ENST00000268720 PSEN2P49810 448 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 USP4Q13107 963 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 XKR4Q5GH76 650 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 FAM72AQ5TYM5 149 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 FAM72DQ6L9T8 149 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 FAM72BQ86X60 149 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 RNF169Q8NCN4 708 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 MCUQ8NE86 351 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 SYBUQ9NX95 663 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 GTF2IRD1Q9UHL9 959 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 CAPN14A8MX76 684 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 ZNF487B1APH4 448 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 TEX44Q53QW1 395 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 LIMS2Q7Z4I7 341 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 COLGALT1Q8NBJ5 622 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 HTR3CQ8WXA8 447 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 PYDC1Q8WXC3 89 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 OLFM3Q96PB7 478 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 AGAP2Q99490 1192 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 EBNA1BP2Q99848 306 aaKnown RBP19.57■□□□□ 0.72
CPNE7-201ENST00000268720 CPSF2Q9P2I0 782 aaKnown RBP19.57■□□□□ 0.72
CPNE7-201ENST00000268720 FZD10Q9ULW2 581 aa19.57■□□□□ 0.72
CPNE7-201ENST00000268720 IQCA1LA6NCM1 817 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 ZCCHC18P0CG32 403 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 NR2C2P49116 596 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 CBLBQ13191 982 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 SLC25A52Q3SY17 297 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 TWF2Q6IBS0 349 aaKnown RBP19.56■□□□□ 0.72
CPNE7-201ENST00000268720 RIPOR1Q6ZS17 1223 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 ARCQ7LC44 396 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 STRADAQ7RTN6 431 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 C10orf107Q8IVU9 208 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 PANX3Q96QZ0 392 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 RHOBTB2Q9BYZ6 727 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 FRMD8Q9BZ67 464 aaPredicted RBP19.56■□□□□ 0.72
CPNE7-201ENST00000268720 STX18Q9P2W9 335 aaKnown RBP19.56■□□□□ 0.72
CPNE7-201ENST00000268720 EMCNQ9ULC0 261 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 ARHGAP42A6NI28 874 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 XPO1O14980 1071 aaKnown RBP19.56■□□□□ 0.72
CPNE7-201ENST00000268720 DGKIO75912 1065 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 IRF9Q00978 393 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 OCRLQ01968 901 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 KDELC2Q7Z4H8 507 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 SPATA6LQ8N4H0 392 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 GSDMBQ8TAX9 411 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 TFB1MQ8WVM0 346 aaKnown RBP19.56■□□□□ 0.72
CPNE7-201ENST00000268720 DUSP16Q9BY84 665 aa19.56■□□□□ 0.72
CPNE7-201ENST00000268720 ANLNQ9NQW6 1124 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms