RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 MAN1A2O60476 641 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 DEAF1O75398 565 aaPredicted RBP16.97■□□□□ 0.31
SCAP-201ENST00000265565 TMCC1O94876 653 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 PNPLA4P41247 253 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 TRPC1P48995 793 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 SPANXN3Q5MJ09 141 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 B3GNT6Q6ZMB0 384 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 ZFRQ96KR1 1074 aaKnown RBP16.97■□□□□ 0.31
SCAP-201ENST00000265565 TRIM62Q9BVG3 475 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 CDT1Q9H211 546 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 MYRFQ9Y2G1 1151 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 SNCAIPQ9Y6H5 919 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 FKBP9O95302 570 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 CPB1P15086 417 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 GOT1P17174 413 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 RPL5P46777 297 aaKnown RBP16.97■□□□□ 0.31
SCAP-201ENST00000265565 CD151P48509 253 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 ZNF484Q5JVG2 852 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 FKBP9P1Q75LS8 142 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 SPATA6LQ8N4H0 392 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 DNERQ8NFT8 737 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 CCDC126Q96EE4 140 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 ZNF333Q96JL9 665 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 B3GNT5Q9BYG0 378 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 LRFN2Q9ULH4 789 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
SCAP-201ENST00000265565 HBS1LQ9Y450 684 aaKnown RBP16.97■□□□□ 0.31
SCAP-201ENST00000265565 ERBB2P04626 1255 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 TGFB3P10600 412 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 FSTL1Q12841 308 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 PTP4A2Q12974 167 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 GTF2H3Q13889 308 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 AMIGO2Q86SJ2 522 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 SCHIP1Q9P0W5 487 aaPredicted RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 HES2Q9Y543 173 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 RIPK3Q9Y572 518 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 H3BRB1 525 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 TSPAN3O60637 253 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 CYP1A1P04798 512 aaPredicted RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 ATP5BP06576 529 aaKnown RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 POU4F1Q01851 419 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 GBE1Q04446 702 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 ATP1A4Q13733 1029 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 NOMO1Q15155 1222 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 TFAP2BQ92481 460 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 FAM162AQ96A26 154 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 ACO2Q99798 780 aaKnown RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 ACE2Q9BYF1 805 aaPredicted RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 CAB39LQ9H9S4 337 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 TMEM63AO94886 807 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 F9P00740 461 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 MYL4P12829 197 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 FASP25445 335 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 SERPINB10P48595 397 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 DCAF4L1Q3SXM0 396 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 PLD3Q8IV08 490 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 KIAA2013Q8IYS2 634 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 COPS5Q92905 334 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
SCAP-201ENST00000265565 ZMYND8Q9ULU4 1186 aaPredicted RBP16.96■□□□□ 0.31
SCAP-201ENST00000265565 RBP1P09455 135 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 PACS1Q6VY07 963 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 MIB1Q86YT6 1006 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 FBXW8Q8N3Y1 598 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 PPP1R13LQ8WUF5 828 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 CHCHD3Q9NX63 227 aaKnown RBP16.96■□□□□ 0.3
SCAP-201ENST00000265565 COQ4Q9Y3A0 265 aa16.96■□□□□ 0.3
SCAP-201ENST00000265565 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 CETPP11597 493 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 CLK1P49759 484 aaKnown RBP16.95■□□□□ 0.3
SCAP-201ENST00000265565 PPM1JQ5JR12 505 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 PCDH18Q9HCL0 1135 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 ATP6AP2A0A1C7CYW4 349 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 RGSL1A5PLK6 1076 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 HDAC3O15379 428 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 ATP6AP2O75787 350 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 PYGLP06737 847 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.35e-8■□□□□ 8.5
SCAP-201ENST00000265565 GABRB2P47870 512 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 GRIA4P48058 902 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 MAB21L3Q8N8X9 362 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 BANPQ8N9N5 519 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 ASIC4Q96FT7 647 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 ST6GALNAC4Q9H4F1 302 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 NT5MQ9NPB1 228 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 VTI1BQ9UEU0 232 aa16.95■□□□□ 0.3
SCAP-201ENST00000265565 TSC22D4Q9Y3Q8 395 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms