RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 ZNF366Q8N895 744 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 CEP76Q8TAP6 659 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 FOXJ1Q92949 421 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 C18orf8Q96DM3 657 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 TOE1Q96GM8 510 aaKnown RBP16.63■□□□□ 0.25
USE1-201ENST00000263897 HSPA12BQ96MM6 686 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 NUSAP1Q9BXS6 441 aaKnown RBP16.63■□□□□ 0.25
USE1-201ENST00000263897 GANQ9H2C0 597 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 TMEM9BQ9NQ34 198 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 PRSS16Q9NQE7 514 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 COX16Q9P0S2 106 aa16.63■□□□□ 0.25
USE1-201ENST00000263897 KIAA1522Q9P206 1035 aaPredicted RBP16.63■□□□□ 0.25
USE1-201ENST00000263897 ASCC3Q8N3C0 2202 aaKnown RBP16.62■□□□□ 0.25
USE1-201ENST00000263897 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 F5H5T6 163 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 DAB1O75553 588 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 MBD3O95983 291 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 IGLV3-19P01714 112 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 ASLP04424 464 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 SERPINF2P08697 491 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 ACADMP11310 421 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 CSKP41240 450 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 MATKP42679 507 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 KLK7P49862 253 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 NME3Q13232 169 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 MTA1Q13330 715 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 STX1AQ16623 288 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 MMS22LQ6ZRQ5 1243 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 RABEPKQ7Z6M1 372 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 MYO19Q96H55 970 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 NPY6RQ99463 290 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 FBRSQ9HAH7 460 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 RRN3Q9NYV6 651 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 LIMA1Q9UHB6 759 aaKnown RBP16.62■□□□□ 0.25
USE1-201ENST00000263897 SLC6A14Q9UN76 642 aa16.62■□□□□ 0.25
USE1-201ENST00000263897 ATXN2Q99700 1313 aaKnown RBP16.62■□□□□ 0.25
USE1-201ENST00000263897 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
USE1-201ENST00000263897 CACNA1EQ15878 2313 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 M0QYT0 321 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 MOCS3O95396 460 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 LSM8O95777 96 aaKnown RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 CFIP05156 583 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 MMEP08473 750 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 SCNN1AP37088 669 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 COPB1P53618 953 aaKnown RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 ST8SIA6P61647 398 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 MYL5Q02045 173 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 PITRM1Q5JRX3 1037 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 WDR45BQ5MNZ6 344 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 SYCP2LQ5T4T6 812 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 DAB2IPQ5VWQ8 1189 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 FBXL22Q6P050 247 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 KDM1BQ8NB78 822 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 CADM4Q8NFZ8 388 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 EPS8L1Q8TE68 723 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 NT5C3BQ969T7 300 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 MRGPRX3Q96LB0 322 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 GPR174Q9BXC1 333 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 FAM207AQ9NSI2 230 aaPredicted RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.61■□□□□ 0.25
USE1-201ENST00000263897 SIK3Q9Y2K2 1263 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 DAAM1Q9Y4D1 1078 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 NUMA1Q14980 2115 aa16.61■□□□□ 0.25
USE1-201ENST00000263897 MUC22E2RYF6 1773 aaPredicted RBP16.61■□□□□ 0.25
USE1-201ENST00000263897 METTL12A8MUP2 240 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 GFPT2O94808 682 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 ENGP17813 658 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 CXCR3P49682 368 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 ZBTB16Q05516 673 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 GFPT1Q06210 699 aaPredicted RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 AUHQ13825 339 aaKnown RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 PLEKHG6Q3KR16 790 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 TTC39BQ5VTQ0 682 aaPredicted RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 XYLT1Q86Y38 959 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 APCDD1Q8J025 514 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 CPA5Q8WXQ8 436 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 DNASE2BQ8WZ79 361 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 MTG2Q9H4K7 406 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 CAPN10Q9HC96 672 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 NOCTQ9UK39 431 aaKnown RBP16.6■□□□□ 0.25
USE1-201ENST00000263897 ERVW-1Q9UQF0 538 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 KNL1Q8NG31 2342 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 PCNX2A6NKB5 2137 aa16.6■□□□□ 0.25
USE1-201ENST00000263897 ADAMTS9Q9P2N4 1935 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 A0A1B0GVM2 712 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms