RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ILDR2Q71H61 639 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA24Q86W54 205 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ZBED3Q96IU2 234 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 MPP4Q96JB8 637 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 CATSPER2Q96P56 530 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 EPAS1Q99814 870 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 NUF2Q9BZD4 464 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SNX15Q9NRS6 342 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ARHGAP26Q9UNA1 814 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SSX2IPQ9Y2D8 614 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 NELFEP18615 380 aaKnown RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 MPSTP25325 297 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 PMLP29590 882 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ICAM3P32942 547 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 RBP5P82980 135 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 TUBB3Q13509 450 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 PDCD2Q16342 344 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 DCAF6Q58WW2 860 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 IL31Q6EBC2 164 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 PAOXQ6QHF9 649 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ACAD11Q709F0 780 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA6LQ8N4H0 392 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 MAPK15Q8TD08 544 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 LRGUKQ96M69 825 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 TBCBQ99426 244 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SORT1Q99523 831 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF670Q9BS34 389 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 GPAMQ9HCL2 828 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 DCDC2Q9UHG0 476 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.38
CHMP3-201ENST00000263856 SULT1E1P49888 294 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.38
CHMP3-201ENST00000263856 TMEM198Q66K66 360 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 LCLAT1Q6UWP7 414 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 ARPINQ7Z6K5 226 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 TDRD5Q8NAT2 981 aaKnown RBP12.71□□□□□ -0.38
CHMP3-201ENST00000263856 SGF29Q96ES7 293 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 CDRT15Q96T59 188 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 FZD8Q9H461 694 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 PTPRHQ9HD43 1115 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 PCDHGB5Q9Y5G0 923 aa12.71□□□□□ -0.38
CHMP3-201ENST00000263856 C19orf81C9J6K1 198 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 STX16-NPEPL1H3BU86 382 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 LTFP02788 710 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 ZNF286BP0CG31 522 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 INSRRP14616 1297 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 CYTH1Q15438 398 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 OLFML2BQ68BL8 750 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 NCBP2-AS2Q69YL0 99 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 NAPRTQ6XQN6 538 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 MCUQ8NE86 351 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 A0A096LPK6 155 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 GSRP00390 522 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 IL1BP01584 269 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 DEUP1Q05D60 604 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 KLF10Q13118 480 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 FLOT2Q14254 428 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 GK3PQ14409 553 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 FAM91A1Q658Y4 838 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 CCNYL1Q8N7R7 359 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 C18orf25Q96B23 403 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 PDZD7Q9H5P4 517 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-201ENST00000263856 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 CITO14578 2027 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 SCN1AP35498 2009 aa12.7□□□□□ -0.38
CHMP3-201ENST00000263856 A0A0A0MRY4 1105 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 PEX1O43933 1283 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 POLBP06746 335 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 FBXW8Q8N3Y1 598 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 SNX31Q8N9S9 440 aa12.69□□□□□ -0.38
CHMP3-201ENST00000263856 CHST13Q8NET6 341 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms