RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SORBS2O94875 1100 aaKnown RBP16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 TKTL1P51854 596 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 TLDC1Q6P9B6 456 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 PIGZQ86VD9 579 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 NUP93Q8N1F7 819 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 TNIP3Q96KP6 325 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 PCYT2Q99447 389 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 GPR20Q99678 358 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 CDY2AQ9Y6F7 541 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 CDY1Q9Y6F8 540 aa16.58■□□□□ 0.25
PDZRN3-201ENST00000263666 CAPN8A6NHC0 703 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 MFSD11O43934 449 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 VAPBO95292 243 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 PIGNO95427 931 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 LGALS2P05162 132 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 ETFBP38117 255 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 STX1BP61266 288 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 CELF3Q5SZQ8 465 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 PACS1Q6VY07 963 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 DDIASQ8IXT1 998 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 MFSD3Q96ES6 412 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 P2RY11Q96G91 374 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 SARS2Q9NP81 518 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 PSAT1Q9Y617 370 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 BUD23O43709 281 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 TSPAN3O60637 253 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 AMHP03971 560 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 LMO2P25791 158 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.242e-11■■■■■ 49.2
PDZRN3-201ENST00000263666 PRKD1Q15139 912 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 DGKDQ16760 1214 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 FBXO47Q5MNV8 452 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 SNRNP27Q8WVK2 155 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 AGAP2Q99490 1192 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 FRMD8P1Q9BZ68 369 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 CYP3A43Q9HB55 503 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 BCAP29Q9UHQ4 241 aa16.58■□□□□ 0.24
PDZRN3-201ENST00000263666 RNF103-CHMP3A0A140T963 221 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 EEF1B2P24534 225 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 PEX2P28328 305 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 NDUFV1P49821 464 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 IL1RL1Q01638 556 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 SATB1Q01826 763 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 CSHL1Q14406 222 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 TCEAL1Q15170 157 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 PFDN4Q9NQP4 134 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 KRT82Q9NSB4 513 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 MYH9P35579 1960 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 GP5P40197 560 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 CTBP1Q13363 440 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 DRICH1Q6PGQ1 229 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ANKLE1Q8NAG6 615 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 DNAJB3Q8WWF6 145 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 CSPG4P5Q96PW8 444 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 KLHL4Q9C0H6 718 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 UBA6A0AVT1 1052 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 HOXD10P28358 340 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 GSTT1P30711 240 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 BCAT1P54687 386 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ADGRF2Q8IZF7 708 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ECSITQ9BQ95 431 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 ZNF212Q9UDV6 495 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 TNFSF13BQ9Y275 285 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 SNX13Q9Y5W8 968 aa16.57■□□□□ 0.24
PDZRN3-201ENST00000263666 SUPT3HO75486 399 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 DLDP09622 509 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 USP17L7P0C7H9 530 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 MPSTP25325 297 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 ZNF460Q14592 562 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 EBF3Q9H4W6 596 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 CCR10P46092 362 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 ARMC3Q5W041 872 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 XYLT2Q9H1B5 865 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 SNX15Q9NRS6 342 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 TEX264Q9Y6I9 313 aa16.56■□□□□ 0.24
PDZRN3-201ENST00000263666 CASQ2O14958 399 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms