RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ANXA11P50995 505 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 ZNF143P52747 638 aaPredicted RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 CNTN1Q12860 1018 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 MTA1Q13330 715 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 SAMD4BQ5PRF9 694 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 POLNQ7Z5Q5 900 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 OR6Y1Q8NGX8 325 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 SPATA13Q96N96 652 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 SERPINB11Q96P15 392 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 KCTD14Q9BQ13 255 aaPredicted RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 UNKQ9C0B0 810 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 ABHD16BQ9H3Z7 469 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 PARVBQ9HBI1 364 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 RGS18Q9NS28 235 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TMEM51Q9NW97 253 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 COMMD8Q9NX08 183 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TMCC3Q9ULS5 477 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ATRNO75882 1429 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 A0A0B4J269 797 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 CBX4O00257 560 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 LTFP02788 710 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 RAG1P15918 1043 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 GLRA2P23416 452 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 NOS2P35228 1153 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 FCGRTP55899 365 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TP53BP2Q13625 1128 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 FAM98BQ52LJ0 330 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 EXOC3L1Q86VI1 746 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 RNF148Q8N7C7 305 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 RMND5BQ96G75 393 aaPredicted RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 ASB2Q96Q27 587 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 MGAT4DA6NG13 374 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 INPP4BO15327 924 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 PIGNO95427 931 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 RAB27AP51159 221 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TBX4P57082 545 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 NOMO3P69849 1222 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ATP13A4Q4VNC1 1196 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 DNAJB3Q8WWF6 145 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ALG3Q92685 438 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 HSFY1Q96LI6 401 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TRAPPC9Q96Q05 1148 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 ACSS3Q9H6R3 686 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ENTPD7Q9NQZ7 604 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TLR8Q9NR97 1041 aaKnown RBP10.98□□□□□ -0.65
CD44-201ENST00000263398 PRDM4Q9UKN5 801 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ROBO3Q96MS0 1386 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 C15orf38-AP3S2A0A0A6YYH1 394 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 MEI4A8MW99 385 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RBAK-RBAKDNI3L0D1 243 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 CLOCKO15516 846 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 USP12O75317 370 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ENDOD1O94919 500 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 PSMG1O95456 288 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 LDLRP01130 860 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ETS1P14921 441 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 TRAF2Q12933 501 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 C15orf59Q2T9L4 293 aaPredicted RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 ARHGAP15Q53QZ3 475 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ARPINQ7Z6K5 226 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 WNT8BQ93098 351 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RNF157Q96PX1 679 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 TBC1D10AQ9BXI6 508 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 DPY30Q9C005 99 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 IL22Q9GZX6 179 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 SNTNA6NMZ2 147 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ZNF682O95780 498 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 IFNA14P01570 189 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 MLNP12872 115 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 UBA1P22314 1058 aaKnown RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 SREBF2Q12772 1141 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ZNF284Q2VY69 593 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 C16orf46Q6P387 395 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 PLEKHM3Q6ZWE6 761 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 LRP10Q7Z4F1 713 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 TFAP2DQ7Z6R9 452 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ATG16L2Q8NAA4 619 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ADAM32Q8TC27 787 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 MID1IP1Q9NPA3 183 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 CCDC167Q9P0B6 97 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 OPLAHO14841 1288 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RGS5O15539 181 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 RRM2P31350 389 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 CCT8P50990 548 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 CCNG1P51959 295 aa10.97□□□□□ -0.65
CD44-201ENST00000263398 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
CD44-201ENST00000263398 KRR1Q13601 381 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms