RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ZDHHC15Q96MV8 337 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SEPHS2Q99611 448 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 AGO4Q9HCK5 861 aaKnown RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 PXMP2Q9NR77 195 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 DUSP12Q9UNI6 340 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 RHOCP08134 193 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 GTF2A2P52657 109 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 OTUD3Q5T2D3 398 aaPredicted RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 CPB2Q96IY4 423 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 TBCBQ99426 244 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 DPY30Q9C005 99 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SH3BP4Q9P0V3 963 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 TMCO1Q9UM00 188 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 MBL2P11226 248 aaPredicted RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 HALP42357 657 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 EPHB3P54753 998 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 FBXO47Q5MNV8 452 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 NT5DC3Q86UY8 548 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ABRAQ8N0Z2 381 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 RNASE11Q8TAA1 199 aaKnown RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 PSMD12O00232 456 aaPredicted RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 JCHAINP01591 159 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 GTF2E2P29084 291 aaKnown RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 PLCL1Q15111 1095 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ADHFE1Q8IWW8 467 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ZCCHC7Q8N3Z6 543 aaKnown RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 A0A0G2JLW4 131 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 UBASH3BQ8TF42 649 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 VMP1Q96GC9 406 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SLITRK2Q9H156 845 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 DAPK2Q9UIK4 370 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SNUPNO95149 360 aaKnown RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ME2P23368 584 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF135P52742 658 aaPredicted RBP17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 NFIAQ12857 509 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 PLD1Q13393 1074 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 DNERQ8NFT8 737 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 SMARCD1Q96GM5 515 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 ACOX2Q99424 681 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 PCDHA3Q9Y5H8 950 aa17.82■□□□□ 0.44
NOTCH3-201ENST00000263388 A0A087WXM4 84 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 KCNQ2O43526 872 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 PIK3CGP48736 1102 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 LAMTOR4Q0VGL1 99 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 EFEMP1Q12805 493 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 GALNT8Q9NY28 637 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 BTBD7Q9P203 1132 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 STX11O75558 287 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 MACC1Q6ZN28 852 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 PTAR1Q7Z6K3 402 aaPredicted RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 TXNRD3Q86VQ6 643 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ROGDIQ9GZN7 287 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 PHGDHO43175 533 aaKnown RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ORC1Q13415 861 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 OR56A4Q8NGH8 313 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 PRDM16Q9HAZ2 1276 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 SLC2A4P14672 509 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 FAM126BQ8IXS8 530 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 GMEB1Q9Y692 573 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 CCDC88CQ9P219 2028 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 AP1S2P56377 157 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 BACE1P56817 501 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 FAM131BQ86XD5 332 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 MCOLN2Q8IZK6 566 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ADI1Q9BV57 179 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 H3BN98 237 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 TAF4O00268 1085 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 IZUMO1Q8IYV9 350 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 A0A087WZ62 844 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 RGS20O76081 388 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 TPP2P29144 1249 aaPredicted RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 NPY2RP49146 381 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 TRAF3Q13114 568 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ZCCHC9Q8N567 271 aaKnown RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 EIF1ADQ8N9N8 165 aaKnown RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 A1CFQ9NQ94 594 aaKnown RBP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 RBM22Q9NW64 420 aaKnown RBP eCLIP17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 ADPRHL2Q9NX46 363 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 KCNK4Q9NYG8 393 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 CCDC167Q9P0B6 97 aa17.81■□□□□ 0.44
NOTCH3-201ENST00000263388 MYL12BO14950 172 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 KPNA6O60684 536 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 DNAJB2P25686 324 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 STAT5AP42229 794 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 C21orf59P57076 290 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ULK2Q8IYT8 1036 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CACTIN-AS1Q8N1I8 211 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF513Q8N8E2 541 aaPredicted RBP17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 SPIRE2Q8WWL2 714 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 DCLK3Q9C098 648 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 SEMA4AQ9H3S1 761 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 C4orf19Q8IY42 314 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ACTRT2Q8TDY3 377 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms