RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 KIF19Q2TAC6 998 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
TRAF4-202ENST00000262396 MS4A13Q5J8X5 152 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 RABGAP1LQ5R372 815 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 RAP1GAP2Q684P5 730 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 MMAAQ8IVH4 418 aaKnown RBP12.68□□□□□ -0.38
TRAF4-202ENST00000262396 GATA6Q92908 595 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
TRAF4-202ENST00000262396 IL21RQ9HBE5 538 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 POPDC2Q9HBU9 364 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 TM9SF3Q9HD45 589 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 ANKRD6Q9Y2G4 727 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-202ENST00000262396 SNX11Q9Y5W9 270 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 LAMA1P25391 3075 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 PI4KAP42356 2102 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
TRAF4-202ENST00000262396 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 EDDM13A0A1B0GTR0 161 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 E5RJQ4 531 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PES1O00541 588 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 SIN3BO75182 1162 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 IL1BP01584 269 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 SRPRAP08240 638 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ZNF883P0CG24 379 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ZNF18P17022 549 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 GRIA4P48058 902 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PSMD8P48556 350 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 CCT8P50990 548 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 OXCT1P55809 520 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 YWHAZP63104 245 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ECT2LQ008S8 904 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 MORC3Q14149 939 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 CST6Q15828 149 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PTPRNQ16849 979 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ZC3H12AQ5D1E8 599 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PITRM1Q5JRX3 1037 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 KIAA0895LQ68EN5 471 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 TRIM59Q8IWR1 403 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 WFDC5Q8TCV5 224 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ADAMTS14Q8WXS8 1223 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 BIRC7Q96CA5 298 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 BTN2A3PQ96KV6 586 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 FCRL2Q96LA5 508 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 PABPC3Q9H361 631 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 MTG2Q9H4K7 406 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 THAP9Q9H5L6 903 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■□□□□ 11.3
TRAF4-202ENST00000262396 SLC25A13Q9UJS0 675 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 WASF3Q9UPY6 502 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
TRAF4-202ENST00000262396 FNDC3AQ9Y2H6 1198 aaKnown RBP12.67□□□□□ -0.38
TRAF4-202ENST00000262396 CEP192Q8TEP8 1941 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 A0A1W2PP55 124 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
TRAF4-202ENST00000262396 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-202ENST00000262396 KCNK3O14649 394 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 MID1O15344 667 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 DFNA5O60443 496 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 GJB3O75712 270 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 TRUB2O95900 331 aaKnown RBP12.66□□□□□ -0.38
TRAF4-202ENST00000262396 TACR2P21452 398 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 SLC8A1P32418 973 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 KRT9P35527 623 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 GRK6P43250 576 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 GPD2P43304 727 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 NUMBP49757 651 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 IL9RQ01113 521 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 PTK2Q05397 1052 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 SULT2A1Q06520 285 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 NME3Q13232 169 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 NADSYN1Q6IA69 706 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 OR6B2Q6IFH4 312 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 MMS22LQ6ZRQ5 1243 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 USP30Q70CQ3 517 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAF4-202ENST00000262396 KIAA0907Q7Z7F0 614 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-202ENST00000262396 DSG4Q86SJ6 1040 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 OR14C36Q8NHC7 312 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
TRAF4-202ENST00000262396 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms