RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ZFAND2BQ8WV99 257 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 GBP5Q96PP8 586 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ECSITQ9BQ95 431 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 PDZD7Q9H5P4 517 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 THAP1Q9NVV9 213 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 TMEM216Q9P0N5 145 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ZNF180Q9UJW8 692 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 PCDHA11Q9Y5I1 949 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 IGKV6-21A0A0C4DH24 114 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 GOLGA8QA0A0J9YX86 632 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 BCLAF3A2AJT9 711 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 GOLGA8OA6NCC3 632 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 A8MXQ7 604 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 E9PBE3 544 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 GOLGA8NF8WBI6 632 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 GOLGA8TH3BQL2 631 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 TRDMT1O14717 391 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 KLHL41O60662 606 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 SERPINA6P08185 405 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 TXNP10599 105 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 SAT1P21673 171 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 TGM2P21980 687 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 L1CAMP32004 1257 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 CPOXP36551 454 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 DSG1Q02413 1049 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 PDK2Q15119 407 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 DLG2Q15700 870 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 CELF3Q5SZQ8 465 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 MBLAC2Q68D91 279 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 SLC9A4Q6AI14 798 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 LCLAT1Q6UWP7 414 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 WDR75Q8IWA0 830 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 PIWIL2Q8TC59 973 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 FAM167AQ96KS9 214 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 KCTD15Q96SI1 283 aaPredicted RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 CAB39LQ9H9S4 337 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ZFYVE28Q9HCC9 887 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 DTLQ9NZJ0 730 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 ABT1Q9ULW3 272 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 AP4E1Q9UPM8 1137 aa10.33□□□□□ -0.76
LIG3-201ENST00000262327 APOBEC2Q9Y235 224 aaKnown RBP10.33□□□□□ -0.76
LIG3-201ENST00000262327 MAGEA13PA6NCF6 341 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 DCXO43602 365 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SIN3BO75182 1162 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 IL18RAPO95256 599 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ZNF286BP0CG31 522 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SERPINB6P35237 376 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SLC6A3Q01959 620 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ASPHQ12797 758 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ACAP1Q15027 740 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 TRMT5Q32P41 509 aaKnown RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 SFT2D3Q587I9 215 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SESTD1Q86VW0 696 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 DEFB107AQ8IZN7 70 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 COLGALT1Q8NBJ5 622 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 UBE2OQ9C0C9 1292 aaKnown RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 VTA1Q9NP79 307 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 SOX13Q9UN79 622 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 KCNK1O00180 336 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CREB3O43889 395 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PEX2P28328 305 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 TYK2P29597 1187 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CCR10P46092 362 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 TUBB3Q13509 450 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PCLAFQ15004 111 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 STILQ15468 1287 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CMPK2Q5EBM0 449 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 C17orf99Q6UX52 265 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PACS1Q6VY07 963 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PLD6Q8N2A8 252 aaKnown RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 NME8Q8N427 588 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ADAM32Q8TC27 787 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 FAM149B1Q96BN6 582 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CSPG4P5Q96PW8 444 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 APOL2Q9BQE5 337 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 UNKQ9C0B0 810 aaKnown RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 SYBUQ9NX95 663 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ADAMTS6Q9UKP5 1117 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 NEMP1O14524 444 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 OPHN1O60890 802 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 P4HA1P13674 534 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 PSMB4P28070 264 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 AQP4P55087 323 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ZNF618Q5T7W0 954 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 ARMCX2Q7L311 632 aa10.32□□□□□ -0.76
LIG3-201ENST00000262327 CDKL3Q8IVW4 592 aaPredicted RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
LIG3-201ENST00000262327 RNF148Q8N7C7 305 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms