RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MFSD7Q6UXD7 560 aa14.58□□□□□ -0.08
CUX2-201ENST00000261726 ITIH5Q86UX2 942 aa14.58□□□□□ -0.08
CUX2-201ENST00000261726 KCNMB4Q86W47 210 aa14.58□□□□□ -0.08
CUX2-201ENST00000261726 CLIP3Q96DZ5 547 aa14.58□□□□□ -0.08
CUX2-201ENST00000261726 SNTG2Q9NY99 539 aa14.58□□□□□ -0.08
CUX2-201ENST00000261726 E7ENQ6 273 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 NPTX2P47972 431 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 TRIT1Q9H3H1 467 aaKnown RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 DCLRE1BQ9H816 532 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 OSGEPQ9NPF4 335 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 NDUFA13Q9P0J0 144 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ICAM1P05362 532 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 FGFR3P22607 806 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 PRR23CQ6ZRP0 262 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 CD302Q8IX05 232 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 RORBQ92753 470 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PROX1Q92786 737 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PDLIM2Q96JY6 352 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 VPS45Q9NRW7 570 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 VPS51Q9UID3 782 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 NRKQ7Z2Y5 1582 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 UBR1Q8IWV7 1749 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ALDH2P05091 517 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 BST2Q10589 180 aaKnown RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 SAPCD2Q86UD0 394 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 IPCEF1Q8WWN9 437 aaPredicted RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 TRIM63Q969Q1 353 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 OSMRQ99650 979 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 CISHQ9NSE2 258 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 FBXL21Q9UKT6 434 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ACAT1P24752 427 aaKnown RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 MGAT1P26572 445 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 FMO4P31512 558 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ERVK-24P63145 666 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 MGAT5Q09328 741 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 C3orf67Q6ZVT6 689 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 KRT74Q7RTS7 529 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 C17orf75Q9HAS0 396 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ARHGAP28Q9P2N2 729 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 TM9SF1O15321 606 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 OR56A5P0C7T3 313 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 SUPT20HL2P0C7V6 817 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 LRRC74BQ6ZQY2 392 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PEG10Q86TG7 708 aaKnown RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 CLVS1Q8IUQ0 354 aaPredicted RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 COL26A1Q96A83 441 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 RMND5BQ96G75 393 aaPredicted RBP14.57□□□□□ -0.08
CUX2-201ENST00000261726 CNPY3Q9BT09 278 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 ATXN3LQ9H3M9 355 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 POMKQ9H5K3 350 aa14.57□□□□□ -0.08
CUX2-201ENST00000261726 PNPLA6Q8IY17 1366 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ACSL4O60488 711 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 MTA2O94776 668 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 UBOX5O94941 541 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 RAG1P15918 1043 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 HPCAL1P37235 193 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 KCTD21Q4G0X4 260 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 TCEAL5Q5H9L2 206 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 PMF1Q6P1K2 205 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 CENPIQ92674 756 aaPredicted RBP14.56□□□□□ -0.08
CUX2-201ENST00000261726 ERGIC2Q96RQ1 377 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ATP13A1Q9HD20 1204 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 THG1LQ9NWX6 298 aaKnown RBP14.56□□□□□ -0.08
CUX2-201ENST00000261726 VTI1BQ9UEU0 232 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 KIAA1257Q9ULG3 409 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 CXCL8P10145 99 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 SOX10P56693 466 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 TBX4P57082 545 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 GRB10Q13322 594 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 CYP4X1Q8N118 509 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 SCAIQ8N9R8 606 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 OSCP1Q8WVF1 389 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 DGCR6LQ9BY27 220 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 STARD7Q9NQZ5 370 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 SF3B1O75533 1304 aaKnown RBP eCLIP14.56□□□□□ -0.08
CUX2-201ENST00000261726 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.56□□□□□ -0.08
CUX2-201ENST00000261726 BTN3A1O00481 513 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 GRIN3BO60391 1043 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 SERPINF2P08697 491 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ARP10275 920 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 PRKAG1P54619 331 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ADIGQ0VDE8 80 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 FAM126BQ8IXS8 530 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ADAM32Q8TC27 787 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 ELL3Q9HB65 397 aaPredicted RBP14.56□□□□□ -0.08
CUX2-201ENST00000261726 RBAK-RBAKDNI3L0D1 243 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 CLOCKO15516 846 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 PTPN4P29074 926 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 GNA13Q14344 377 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 MIIPQ5JXC2 388 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 GRTP1Q5TC63 336 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 TOR4AQ9NXH8 423 aa14.56□□□□□ -0.08
CUX2-201ENST00000261726 CCDC167Q9P0B6 97 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms