RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CXXC1Q9P0U4 656 aaPredicted RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 YIPF1Q9Y548 306 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 STK10O94804 968 aaKnown RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 APOEP02649 317 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 FGBP02675 491 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 GARSP41250 739 aaKnown RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 MLLT6P55198 1093 aaPredicted RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 MAGOHP61326 146 aaKnown RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 AUHQ13825 339 aaKnown RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 C6orf118Q5T5N4 469 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 PYROXD1Q8WU10 500 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 FERMT1Q9BQL6 677 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 ROPN1BQ9BZX4 212 aaPredicted RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 VPS37BQ9H9H4 285 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 ROPN1Q9HAT0 212 aaPredicted RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 PRKAG2Q9UGJ0 569 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 CLUHO75153 1309 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 SLC12A8A0AV02 714 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 EIF3HO15372 352 aaKnown RBP eCLIP22.98■■□□□ 1.27
SIX3-201ENST00000260653 RGS16O15492 202 aaPredicted RBP22.98■■□□□ 1.27
SIX3-201ENST00000260653 CAPN2P17655 700 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 PPM1AP35813 382 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 TUBP50607 506 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 ATP1A2P50993 1020 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 ZNF567Q8N184 647 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 FBXO36Q8NEA4 188 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 TLCD1Q96CP7 247 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 HDAC11Q96DB2 347 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 CEP295NLQ96MC4 621 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 ZNF512Q96ME7 567 aaPredicted RBP22.98■■□□□ 1.27
SIX3-201ENST00000260653 NDFIP2Q9NV92 336 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 MPP6Q9NZW5 540 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 CTNNAL1Q9UBT7 734 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 FGF10O15520 208 aaPredicted RBP22.98■■□□□ 1.27
SIX3-201ENST00000260653 OPHN1O60890 802 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 LINC00271P0C7V0 271 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 HMGA1P17096 107 aaKnown RBP22.98■■□□□ 1.27
SIX3-201ENST00000260653 MX2P20592 715 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 GPX6P59796 221 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 FPGSQ05932 587 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 PPIGQ13427 754 aaKnown RBP eCLIP22.98■■□□□ 1.27
SIX3-201ENST00000260653 RAB33AQ14088 237 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 VANGL2Q9ULK5 521 aa22.98■■□□□ 1.27
SIX3-201ENST00000260653 HTR7P34969 479 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 SEMA5AQ13591 1074 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 MS4A13Q5J8X5 152 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 PPP1R21Q6ZMI0 780 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 CROCCP2Q86T23 111 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 IGDCC3Q8IVU1 814 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 AGGF1Q8N302 714 aaeCLIP22.97■■□□□ 1.27
SIX3-201ENST00000260653 C1orf74Q96LT6 269 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 CATSPERBQ9H7T0 1116 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 MRPL17Q9NRX2 175 aaKnown RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 HSFX1Q9UBD0 423 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 ZMYND8Q9ULU4 1186 aaPredicted RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 CHMP2BQ9UQN3 213 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 PCDHB12Q9Y5F1 795 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 A0A087WUV0 522 aaPredicted RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 E7EVH7 732 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 FGF18O76093 207 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 PTPN3P26045 913 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 IFI35P80217 286 aaPredicted RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 HTRA4P83105 476 aaPredicted RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 NRG1Q02297 640 aaPredicted RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 CAND1Q86VP6 1230 aaKnown RBP22.97■■□□□ 1.27
SIX3-201ENST00000260653 ARHGAP12Q8IWW6 846 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 MCOLN1Q9GZU1 580 aa22.97■■□□□ 1.27
SIX3-201ENST00000260653 IGLV3-27P01718 113 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 PSMB4P28070 264 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 SSTR1P30872 391 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 PPARDQ03181 441 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 KDM7AQ6ZMT4 941 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ZBED2Q9BTP6 218 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 CARNS1A5YM72 827 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 TEX28O15482 410 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 TPSB2P20231 275 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ELK3P41970 407 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ALDH1A3P47895 512 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 LMAN1P49257 510 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 IRAK1P51617 712 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 STAT4Q14765 748 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 TPSAB1Q15661 275 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ARHGAP36Q6ZRI8 547 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ZNF534Q76KX8 674 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ZNF683Q8IZ20 524 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 FIBCD1Q8N539 461 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 ATP6V0D2Q8N8Y2 350 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 BTN2A3PQ96KV6 586 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 BRD8Q9H0E9 1235 aa22.96■■□□□ 1.27
SIX3-201ENST00000260653 DOCK4Q8N1I0 1966 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 DFFAO00273 331 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 PRRG1O14668 218 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 TCEA3O75764 348 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 CSH1P0DML2 217 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 CSH2P0DML3 217 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 ZBTB17Q13105 803 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 PID1Q7Z2X4 250 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 ATP11CQ8NB49 1132 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 KLHL8Q9P2G9 620 aaPredicted RBP22.95■■□□□ 1.26
SIX3-201ENST00000260653 TEX264Q9Y6I9 313 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms