RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
ALPK3-201ENST00000258888 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 GANQ9H2C0 597 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 PHGDHO43175 533 aaKnown RBP13.72□□□□□ -0.21
ALPK3-201ENST00000258888 HS6ST1O60243 411 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 RAMP2O60895 175 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 TSC22D2O75157 780 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 ZSCAN5DPP0CG00 497 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 KATNAL2Q8IYT4 538 aa13.72□□□□□ -0.21
ALPK3-201ENST00000258888 MAPK10P53779 464 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 TPD52L3Q96J77 140 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
ALPK3-201ENST00000258888 AAASQ9NRG9 546 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 BCL10O95999 233 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 PAEPP09466 180 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 FAM228AQ86W67 206 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 RP1L1Q8IWN7 2480 aaPredicted RBP13.71□□□□□ -0.21
ALPK3-201ENST00000258888 PSMD7P51665 324 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 BRSK2Q8IWQ3 736 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 NSMCE2Q96MF7 247 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 RNF145Q96MT1 663 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 ANKRD27Q96NW4 1050 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.21
ALPK3-201ENST00000258888 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 KRR1Q13601 381 aaKnown RBP13.71□□□□□ -0.21
ALPK3-201ENST00000258888 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 PAX7P23759 505 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 CRABP2P29373 138 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 BDH2Q9BUT1 245 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 NDUFAF1Q9Y375 327 aa13.71□□□□□ -0.21
ALPK3-201ENST00000258888 CCDC154A6NI56 674 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 LDLRP01130 860 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 USP17L7P0C7H9 530 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 DPYSL3Q14195 570 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 CDRT15Q96T59 188 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 MIEF1Q9NQG6 463 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 SH3BP4Q9P0V3 963 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 LIMD1Q9UGP4 676 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 PROCP04070 461 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 BOP1Q14137 746 aaKnown RBP13.71□□□□□ -0.22
ALPK3-201ENST00000258888 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 TMEM114B3SHH9 223 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 TRIM24O15164 1050 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.22
ALPK3-201ENST00000258888 DPP10Q8N608 796 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 MIEF2Q96C03 454 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.22
ALPK3-201ENST00000258888 E5RJQ4 531 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 ATG7O95352 703 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 CRADDP78560 199 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 HERC6Q8IVU3 1022 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 ZMYM5Q9UJ78 669 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 ZNF839A8K0R7 811 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 RAB14P61106 215 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SLC6A3Q01959 620 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 RAD18Q9NS91 495 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 TPP1O14773 563 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 OR1E1P30953 314 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 INAQ16352 499 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 WDR59Q6PJI9 974 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 MARK4Q96L34 752 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 CIPCQ9C0C6 399 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 LNPEPQ9UIQ6 1025 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 GRK3P35626 688 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 DLG4P78352 724 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 MRPS22P82650 360 aaKnown RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 DDR2Q16832 855 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 FAM126BQ8IXS8 530 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 OPTNQ96CV9 577 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 AVENQ9NQS1 362 aaPredicted RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 TLR8Q9NR97 1041 aaKnown RBP13.7□□□□□ -0.22
ALPK3-201ENST00000258888 ANKRD63C9JTQ0 380 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 CASP5P51878 434 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 EPHB3P54753 998 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 DEFB106AQ8N104 65 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 KIDINS220Q9ULH0 1771 aa13.7□□□□□ -0.22
ALPK3-201ENST00000258888 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms