RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 WDR41Q9HAD4 459 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZFYVE1Q9HBF4 777 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 RHBDL2Q9NX52 303 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF112Q9UJU3 913 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 INPP4BO15327 924 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF438Q7Z4V0 828 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 GPR141Q7Z602 305 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 CENPTQ96BT3 561 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 LLGL2Q6P1M3 1020 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZBTB49Q6ZSB9 765 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 CXCL11O14625 94 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 ADRB2P07550 413 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 CAMKK2Q96RR4 588 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 HMX1Q9NP08 348 aaPredicted RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 PCDHA3Q9Y5H8 950 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 SERPINB11Q96P15 392 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 VTA1Q9NP79 307 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 SEMA4BQ9NPR2 832 aaPredicted RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 PSMD12O00232 456 aaPredicted RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 PGAM1P18669 254 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 TYMPP19971 482 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 PSMB4P28070 264 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 BCL2L1Q07817 233 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 METTL6Q8TCB7 284 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 NMD3Q96D46 503 aaKnown RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 TLR10Q9BXR5 811 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 MRGBPQ9NV56 204 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 SPG21Q9NZD8 308 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 SLC24A2Q9UI40 661 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 TM6SF2Q9BZW4 377 aa19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 RSPH9Q9H1X1 276 aaPredicted RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 RBM43Q6ZSC3 357 aaKnown RBP19.06■□□□□ 0.64
SMARCC1-201ENST00000254480 KPNA6O60684 536 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 NUDT14O95848 222 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 CYP2A7P20853 494 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 GP5P40197 560 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TRAF7Q6Q0C0 670 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TRAPPC5Q8IUR0 188 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 OR52K1Q8NGK4 314 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 MANSC4A6NHS7 340 aaPredicted RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 MPOP05164 745 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 PIRTP0C851 137 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TSPAN8P19075 237 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 ELAVL2Q12926 359 aaKnown RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 SEMA6AQ9H2E6 1030 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 POPDC2Q9HBU9 364 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 UBA2Q9UBT2 640 aaPredicted RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 NCAM2O15394 837 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 RAB27AP51159 221 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 FASTKQ14296 549 aaKnown RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 GRTP1Q5TC63 336 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TMC3Q7Z5M5 1100 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 MILR1Q7Z6M3 343 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 HEATR4Q86WZ0 1026 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 GPC2Q8N158 579 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 ASB7Q9H672 318 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TM9SF1O15321 606 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 CNTFP26441 200 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 IRX1P78414 480 aaPredicted RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 FAM228AQ86W67 206 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 TMEM79Q9BSE2 394 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 MAP10Q9P2G4 905 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 CLDN5O00501 218 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 DYRK3O43781 588 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.05■□□□□ 0.648e-7■□□□□ 11.1
SMARCC1-201ENST00000254480 MARCH2Q9P0N8 246 aa19.05■□□□□ 0.64
SMARCC1-201ENST00000254480 CBX6O95503 412 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GLRA2P23416 452 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SERPINB1P30740 379 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 MMP13P45452 471 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 USP39Q53GS9 565 aaKnown RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 FAM183BPQ6ZVS7 135 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 MAP4K3Q8IVH8 894 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 RAD51BO15315 384 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 DCXO43602 365 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 H2AFXP16104 143 aaPredicted RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 PTPN1P18031 435 aaKnown RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 FGFR3P22607 806 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 DEFA1P59665 94 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 DEFA3P59666 94 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SLC41A1Q8IVJ1 513 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SLC22A9Q8IVM8 553 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 EXOC2Q96KP1 924 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 WDR18Q9BV38 432 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 ELOVL4Q9GZR5 314 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 RAD54BQ9Y620 910 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 REREQ9P2R6 1566 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 CD86P42081 329 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SHROOM1Q2M3G4 852 aaPredicted RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 IL31RAQ8NI17 732 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 VPS45Q9NRW7 570 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 TAS2R13Q9NYV9 303 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 NT5C1B-RDH14C9J2C7 533 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 AMHP03971 560 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF7P17097 686 aaPredicted RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GRK2P25098 689 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SKIV2L2P42285 1042 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms