RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PON1P27169 355 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PPP3CCP48454 512 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 SULT1E1P49888 294 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 TPTEP56180 551 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 MRNIPQ6NTE8 343 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF544Q6NX49 715 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 RAB42Q8N4Z0 105 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 SIPA1Q96FS4 1042 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PIF1Q9H611 641 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 OSGEPQ9NPF4 335 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 NPHP3-ACAD11A0A0J9YXS1 232 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM92AA1XBS5 289 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 CSPG5O95196 566 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 NUDT17P0C025 328 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 CHRM3P20309 590 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 RASA1P20936 1047 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 MAGEA8P43361 318 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 AP1S2P56377 157 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 TNK2Q07912 1038 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PTPAQ15257 358 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PYDC2Q56P42 97 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PAGE2BQ5JRK9 111 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PMF1Q6P1K2 205 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 KCTD17Q8N5Z5 321 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PPP1R16BQ96T49 567 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 TCF12Q99081 682 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 TTYH1Q9H313 450 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 PNMA8BQ9ULN7 279 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 AP3M1Q9Y2T2 418 aa13.44□□□□□ -0.26
PCDHGA3-201ENST00000253812 LOC110117498-PIK3R3F6TDL0 507 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 AXIN1O15169 862 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TFRCP02786 760 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 MPOP05164 745 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 LCP1P13796 627 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 SCN4BQ8IWT1 228 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 DRAXINQ8NBI3 349 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 CCDC167Q9P0B6 97 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TRMT6Q9UJA5 497 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 MOSPD1Q9UJG1 213 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 SCAF8Q9UPN6 1271 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 EPN2O95208 641 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 VCLP18206 1134 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 GRIK1P39086 918 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 RALGDSQ12967 914 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 CCNIQ14094 377 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 PGBD2Q6P3X8 592 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 PAGE2Q7Z2X7 111 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 NECAB2Q7Z6G3 386 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 PEX5LQ8IYB4 626 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 C8orf4Q9NR00 106 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 KLHL1Q9NR64 748 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 PRPF19Q9UMS4 504 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 RARBP10826 455 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 EFNA5P52803 228 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 ENPEPQ07075 957 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TNFAIP8L3Q5GJ75 292 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 HIPK1Q86Z02 1210 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM126BQ8IXS8 530 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM47BQ8NA70 645 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 GALNT6Q8NCL4 622 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 SPPL2AQ8TCT8 520 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 MYDGFQ969H8 173 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TMEM121Q9BTD3 319 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 POLR3FQ9H1D9 316 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 RNF112Q9ULX5 631 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 BCLAF3A2AJT9 711 aaKnown RBP13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 TRIM38O00635 465 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 CCNE2O96020 404 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 MYBP10242 640 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 COPZ1P61923 177 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 BTBD8Q5XKL5 378 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 SAPCD2Q86UD0 394 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF276Q8N554 614 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 CAMKK1Q8N5S9 505 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAR1Q8WVX9 515 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 AP3S1Q92572 193 aa13.43□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM240BA0A1B0GVZ2 78 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 PROSCO94903 275 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 GRIA3P42263 894 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 CSNK2BP67870 215 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 PHKG1Q16816 387 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 UGT3A1Q6NUS8 523 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms