RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 FUT11Q495W5 492 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 CCDC14Q49A88 953 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 C5orf22Q49AR2 442 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 MBLAC2Q68D91 279 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 LAIR1Q6GTX8 287 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 DNAJC24Q6P3W2 148 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 HMGB4Q8WW32 186 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 SORCS1Q8WY21 1168 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 RPRD1AQ96P16 312 aaPredicted RBP25.91■■□□□ 1.74
LSM7-201ENST00000252622 TAS2R14Q9NYV8 317 aa25.91■■□□□ 1.74
LSM7-201ENST00000252622 BCCIPQ9P287 314 aaKnown RBP eCLIP25.91■■□□□ 1.74
LSM7-201ENST00000252622 GPR179Q6PRD1 2367 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 OTOGLQ3ZCN5 2332 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 EML5Q05BV3 1969 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 H0Y626 953 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 GJB6O95452 261 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 ATP5BP06576 529 aaKnown RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 GZMAP12544 262 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 ATP11AP98196 1134 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 STARD3Q14849 445 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 USP39Q53GS9 565 aaKnown RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 FSCBQ5H9T9 825 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 KIAA1211LQ6NV74 962 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 STRADAQ7RTN6 431 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 C11orf74Q86VG3 221 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 CCAR2Q8N163 923 aaKnown RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 RNF214Q8ND24 703 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 IGSF8Q969P0 613 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 KIAA1522Q9P206 1035 aaPredicted RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 VANGL2Q9ULK5 521 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 RAD54BQ9Y620 910 aa25.9■■□□□ 1.74
LSM7-201ENST00000252622 BZW2Q9Y6E2 419 aaKnown RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 MUC22E2RYF6 1773 aaPredicted RBP25.9■■□□□ 1.74
LSM7-201ENST00000252622 WASH3PC4AMC7 463 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 GYPCP04921 128 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 DLDP09622 509 aaKnown RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 GABRG2P18507 467 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 POLR2EP19388 210 aaKnown RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 GPD1P21695 349 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 RFC1P35251 1148 aaPredicted RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 C15orf59Q2T9L4 293 aaPredicted RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 PPP1R15BQ5SWA1 713 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 HGSNATQ68CP4 663 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 FAM131BQ86XD5 332 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 CENPIQ92674 756 aaPredicted RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 TTC17Q96AE7 1141 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 C1orf74Q96LT6 269 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 SIK2Q9H0K1 926 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 NCDNQ9UBB6 729 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 GMEB2Q9UKD1 530 aa25.89■■□□□ 1.74
LSM7-201ENST00000252622 INTS6Q9UL03 887 aaKnown RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 LUC7L2Q9Y383 392 aaKnown RBP25.89■■□□□ 1.74
LSM7-201ENST00000252622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.89■■□□□ 1.743e-26■□□□□ 8.3
LSM7-201ENST00000252622 RIF1Q5UIP0 2472 aaKnown RBP25.88■■□□□ 1.73
LSM7-201ENST00000252622 DDX3XO00571 662 aaKnown RBP eCLIP25.88■■□□□ 1.73
LSM7-201ENST00000252622 ZBTB24O43167 697 aaPredicted RBP25.88■■□□□ 1.73
LSM7-201ENST00000252622 ASLP04424 464 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 SKILP12757 684 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 RRM1P23921 792 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 GGCXP38435 758 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 SLC12A1Q13621 1099 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 LPAL2Q16609 132 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 PTPRNQ16849 979 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 CDO1Q16878 200 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 WDR59Q6PJI9 974 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 SERPINA13PQ6UXR4 307 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.88■■□□□ 1.73
LSM7-201ENST00000252622 C14orf80Q86SX3 495 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 CIR1Q86X95 450 aaPredicted RBP25.88■■□□□ 1.73
LSM7-201ENST00000252622 ZNF683Q8IZ20 524 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 CYB5D2Q8WUJ1 264 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 ZC3H10Q96K80 434 aaKnown RBP25.88■■□□□ 1.73
LSM7-201ENST00000252622 HAPLN3Q96S86 360 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 PLA2G4CQ9UP65 541 aa25.88■■□□□ 1.73
LSM7-201ENST00000252622 FAM186AA6NE01 2351 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 ANKRD62A6NC57 917 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 TMCO5BA8MYB1 307 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 MOCS3O95396 460 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 PRKCHP24723 683 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 CSKP41240 450 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 OXCT1P55809 520 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 TDRD12Q587J7 1177 aaKnown RBP25.87■■□□□ 1.73
LSM7-201ENST00000252622 PITRM1Q5JRX3 1037 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 KBTBD6Q86V97 674 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 PGBD3Q8N328 593 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 FAM160A2Q8N612 972 aaPredicted RBP25.87■■□□□ 1.73
LSM7-201ENST00000252622 CPLX3Q8WVH0 158 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 TMEM245Q9H330 911 aa25.87■■□□□ 1.73
LSM7-201ENST00000252622 SYNCRIPO60506 623 aaKnown RBP25.86■■□□□ 1.73
LSM7-201ENST00000252622 CLDN11O75508 207 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 SERPING1P05155 500 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 NDUFV2P19404 249 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 P2RY2P41231 377 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 IRAK1P51617 712 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 ZNF143P52747 638 aaPredicted RBP25.86■■□□□ 1.73
LSM7-201ENST00000252622 CDH4P55283 916 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 BYSLQ13895 437 aaKnown RBP25.86■■□□□ 1.73
LSM7-201ENST00000252622 PLEKHG6Q3KR16 790 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 ARL13BQ3SXY8 428 aa25.86■■□□□ 1.73
LSM7-201ENST00000252622 FNDC3BQ53EP0 1204 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms