RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MROH9Q5TGP6 573 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 RBM44Q6ZP01 1051 aaKnown RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 HPS6Q86YV9 775 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TTC39CQ8N584 583 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 CCDC33Q8N5R6 958 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 EFCAB3Q8N7B9 438 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 ICA1LQ8NDH6 482 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 GCNAQ96QF7 691 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 LPIN3Q9BQK8 851 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 SLC4A5Q9BY07 1137 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 PCDH18Q9HCL0 1135 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 SNTG2Q9NY99 539 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 APOBEC2Q9Y235 224 aaKnown RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 DPYSL4O14531 572 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 APOEP02649 317 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 SCNN1BP51168 640 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TMEM62Q0P6H9 643 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 KIZQ2M2Z5 673 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 GRAMD1BQ3KR37 738 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 FASTKD1Q53R41 847 aaKnown RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 TCHHL1Q5QJ38 904 aaPredicted RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 TEDDM1Q5T9Z0 273 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 MBLAC2Q68D91 279 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 MAVSQ7Z434 540 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TRIM74Q86UV6 250 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TRIM73Q86UV7 250 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 KLHL23Q8NBE8 558 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 PCDH19Q8TAB3 1148 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 LRRN4Q8WUT4 740 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TRIM56Q9BRZ2 755 aaKnown RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 B3GNT5Q9BYG0 378 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 FAM124BQ9H5Z6 455 aaPredicted RBP19.45■□□□□ 0.7
SNX4-201ENST00000251775 HEY1Q9Y5J3 304 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 RALGAPA2Q2PPJ7 1873 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 CAPN8A6NHC0 703 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 KCNN4O15554 427 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 ITGAXP20702 1163 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 FDFT1P37268 417 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 DEUP1Q05D60 604 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 PDK2Q15119 407 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 OGFRL1Q5TC84 451 aaPredicted RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 FAXCQ5TGI0 409 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 TRMT10BQ6PF06 316 aaKnown RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 KBTBD6Q86V97 674 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 MARVELD2Q8N4S9 558 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 SLC35F5Q8WV83 523 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 SNRNP25Q9BV90 132 aaKnown RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 STN1Q9H668 368 aaKnown RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 RNF19AQ9NV58 838 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 TUBGCP4Q9UGJ1 667 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 GINS2Q9Y248 185 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 SSX2IPQ9Y2D8 614 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 INPP5FQ9Y2H2 1132 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 PAPSS1O43252 624 aaPredicted RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 TFE3P19532 575 aaPredicted RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 YY1P25490 414 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 RBL1P28749 1068 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 HOXA11P31270 313 aaPredicted RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 RPL5P46777 297 aaKnown RBP19.44■□□□□ 0.7
SNX4-201ENST00000251775 SLC6A3Q01959 620 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 STILQ15468 1287 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 BOLA3Q53S33 107 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 B3GNT6Q6ZMB0 384 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 UNC5AQ6ZN44 842 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 TMEM110Q86TL2 294 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 MAP7D3Q8IWC1 876 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 DEFB107AQ8IZN7 70 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 PPP1R14CQ8TAE6 165 aa19.44■□□□□ 0.7
SNX4-201ENST00000251775 SLC15A5A6NIM6 579 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 HCRTO43612 131 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 SMPD1P17405 629 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 LDLRAD1Q5T700 205 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 ATG14Q6ZNE5 492 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 METTL25Q8N6Q8 603 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 EIF2AQ9BY44 585 aaKnown RBP19.43■□□□□ 0.7
SNX4-201ENST00000251775 UBAP1Q9NZ09 502 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 HES2Q9Y543 173 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 APOL1O14791 398 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 DENRO43583 198 aaKnown RBP19.43■□□□□ 0.7
SNX4-201ENST00000251775 FGF3P11487 239 aaPredicted RBP19.43■□□□□ 0.7
SNX4-201ENST00000251775 SDC4P31431 198 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 BCAR1P56945 870 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 CCNA1P78396 465 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 PEX6Q13608 980 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 TMEM259Q4ZIN3 620 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 KLHDC10Q6PID8 442 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 ZNF410Q86VK4 478 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 PPP1R13LQ8WUF5 828 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 C18orf25Q96B23 403 aaPredicted RBP19.43■□□□□ 0.7
SNX4-201ENST00000251775 CDHR5Q9HBB8 845 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 SETD4Q9NVD3 440 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 PAK5Q9P286 719 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 PCDHGB4Q9UN71 923 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 DTNAQ9Y4J8 743 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 PCDHGB5Q9Y5G0 923 aa19.43■□□□□ 0.7
SNX4-201ENST00000251775 CLPTM1O96005 669 aa19.42■□□□□ 0.7
SNX4-201ENST00000251775 MMP3P08254 477 aa19.42■□□□□ 0.7
SNX4-201ENST00000251775 SLC1A6P48664 564 aa19.42■□□□□ 0.7
SNX4-201ENST00000251775 HDAC4P56524 1084 aa19.42■□□□□ 0.7
SNX4-201ENST00000251775 RPL10AP62906 217 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms