RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 MED7O43513 233 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 MOCS3O95396 460 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 PTMSP20962 102 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 BNC1Q01954 994 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 CDH18Q13634 790 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 NADSYN1Q6IA69 706 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 ARHGEF19Q8IW93 802 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 CARNMT1Q8N4J0 409 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 DQX1Q8TE96 717 aaKnown RBP13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 GANCQ8TET4 914 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 TTC17Q96AE7 1141 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 RWDD2AQ9UIY3 292 aa13.39□□□□□ -0.27
APOBEC3A-201ENST00000249116 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 GON4LQ3T8J9 2241 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 CBFA2T3O75081 653 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 FSBPO95073 299 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 CALCAP01258 141 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 APOEP02649 317 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 AFPP02771 609 aaKnown RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 KRT5P13647 590 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 GPD2P43304 727 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 GRIA4P48058 902 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 USP30Q70CQ3 517 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 PNPLA1Q8N8W4 532 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 KDM1BQ8NB78 822 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 RHBDD1Q8TEB9 315 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 BIRC7Q96CA5 298 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 PRICKLE1Q96MT3 831 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 CDC6Q99741 560 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 NAALADL1Q9UQQ1 740 aa13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 FNDC3AQ9Y2H6 1198 aaKnown RBP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.38□□□□□ -0.27
APOBEC3A-201ENST00000249116 MUC22E2RYF6 1773 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 FGFR1OPO95684 399 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 MOCS2O96007 188 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 FYNP06241 537 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 CD27P26842 260 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 CSKP41240 450 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 MEA1Q16626 185 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 KIF19Q2TAC6 998 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 HNRNPA1L2Q32P51 320 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 DBX2Q6ZNG2 339 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 ADAT2Q7Z6V5 191 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 STK32AQ8WU08 396 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 LMLNQ96KR4 655 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 MED15Q96RN5 788 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 INTS2Q9H0H0 1204 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 NUCKS1Q9H1E3 243 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 TJP2Q9UDY2 1190 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 CNTN6Q9UQ52 1028 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 SNX11Q9Y5W9 270 aa13.37□□□□□ -0.27
APOBEC3A-201ENST00000249116 TARSL2A2RTX5 802 aaKnown RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SIN3BO75182 1162 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 LUC7L3O95232 432 aaKnown RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SRPRAP08240 638 aaKnown RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 RNF219Q5W0B1 726 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 KIAA0895LQ68EN5 471 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SLCO6A1Q86UG4 719 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 TAC4Q86UU9 113 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 CHSY1Q86X52 802 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 BAHD1Q8TBE0 780 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 ADAM32Q8TC27 787 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 IGSF8Q969P0 613 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SKA1Q96BD8 255 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 MYO19Q96H55 970 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 MTG2Q9H4K7 406 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3A-201ENST00000249116 FBXL12Q9NXK8 326 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms