RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CGRRF1Q99675 332 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 ACP6Q9NPH0 428 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 PPANQ9NQ55 473 aaKnown RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 DDX56Q9NY93 547 aaKnown RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 OAS3Q9Y6K5 1087 aaKnown RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 SIP14410 1827 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 MROH7Q68CQ1 1323 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 KIAA1217Q5T5P2 1943 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ZNFX1Q9P2E3 1918 aaKnown RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 A0A0B4J269 797 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 TCRBV7S2A1N4TA0A589 114 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF891A8MT65 544 aaPredicted RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 MAN2B1O00754 1011 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 NDC80O14777 642 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 RASGRF2O14827 1237 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CLDN3O15551 220 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ASAP2O43150 1006 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SHBGP04278 402 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 AMY2AP04746 511 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CLTAP09496 248 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ATP2A2P16615 1042 aaKnown RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 TNNI1P19237 187 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 AMY2BP19961 511 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 DRD4P21917 467 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 RRM1P23921 792 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CETN2P41208 172 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 GMPSP49915 693 aaPredicted RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 NOMO3P69849 1222 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 KRT17Q04695 432 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 TUSC3Q13454 348 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CCNG2Q16589 344 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SKIDA1Q1XH10 827 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 PLEKHA7Q6IQ23 1121 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 STRA8Q7Z7C7 330 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SUGP1Q8IWZ8 645 aaKnown RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 RHOT1Q8IXI2 618 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 KATNAL2Q8IYT4 538 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CNPY4Q8N129 248 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 EXD1Q8NHP7 514 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 DEPTORQ8TB45 409 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 CCHCR1Q8TD31 782 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SNF8Q96H20 258 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SERPINB12Q96P63 405 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 WRNIP1Q96S55 665 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 DCLK3Q9C098 648 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 RABEP2Q9H5N1 569 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF302Q9NR11 478 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SLC5A4Q9NY91 659 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 RBAKQ9NYW8 714 aaPredicted RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 FBXO40Q9UH90 709 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 DDX20Q9UHI6 824 aaKnown RBP8.25□□□□□ -1.09
CXCR4-201ENST00000241393 SSC5DA1L4H1 1573 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 UMODL1Q5DID0 1318 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ADGRA2Q96PE1 1338 aa8.25□□□□□ -1.09
CXCR4-201ENST00000241393 ANKRD65E5RJM6 399 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 K7ERI5 159 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 FZD9O00144 591 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NEMP1O14524 444 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 THAP12O43422 761 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 VNN1O95497 513 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 LSM8O95777 96 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 GHRP10912 638 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 GLRA2P23416 452 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 IVDP26440 423 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TMOD1P28289 359 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF132P52740 706 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 EFNA5P52803 228 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 HMGCS2P54868 508 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 SOX10P56693 466 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 SESN3P58005 492 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ACTN3Q08043 901 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 KLF1Q13351 362 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 SURF1Q15526 300 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TARBP2Q15633 366 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 LACTB2Q53H82 288 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 LRRC38Q5VT99 294 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 BTBD8Q5XKL5 378 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 IQSEC1Q6DN90 963 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 DRICH1Q6PGQ1 229 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CRELD2Q6UXH1 353 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 MMS22LQ6ZRQ5 1243 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CCDC121Q6ZUS5 278 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 EXOC8Q8IYI6 725 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CCDC89Q8N998 374 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ATXN2LQ8WWM7 1075 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 E2F7Q96AV8 911 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF317Q96PQ6 595 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 PI4K2AQ9BTU6 479 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF518BQ9C0D4 1074 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ADAM7Q9H2U9 754 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 PCDH18Q9HCL0 1135 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NRBP2Q9NSY0 501 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 OXSMQ9NWU1 459 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ADAM22Q9P0K1 906 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 FBLN5Q9UBX5 448 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms