RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 RASGRP2Q7LDG7 609 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 PLEKHH3Q7Z736 793 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 EPS8L3Q8TE67 593 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 AASDHPPTQ9NRN7 309 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TRIM64A6NGJ6 449 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 SSNA1O43805 119 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TSPAN9O75954 239 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 MUTP22033 750 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 CCR1P32246 355 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 HSPA13P48723 471 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 OASLQ15646 514 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 JAMLQ86YT9 394 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ELMO3Q96BJ8 720 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 SGSM3Q96HU1 749 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 MYOCQ99972 504 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FBXO44Q9H4M3 255 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ALG6Q9Y672 507 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 A0A0A6YYK5 440 aaPredicted RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 TP73O15350 636 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ZBTB14O43829 449 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 KPNA6O60684 536 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TBX4P57082 545 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 KRT74Q7RTS7 529 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TRNT1Q96Q11 434 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 KPNA5O15131 536 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TKFCQ3LXA3 575 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 ZNF280DQ6N043 979 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 C4orf22Q6V702 233 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SLC22A9Q8IVM8 553 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 RIBC1Q8N443 379 aaPredicted RBP13.46□□□□□ -0.25
NEK9-201ENST00000238616 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 APBA2Q99767 749 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 INVSQ9Y283 1065 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 KDM6BO15054 1643 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 AREL1O15033 823 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SGPL1O95470 568 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 GRB14Q14449 540 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SPATA20Q8TB22 786 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SUSD6Q92537 303 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TMEM120AQ9BXJ8 343 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 MID1IP1Q9NPA3 183 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SETD4Q9NVD3 440 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TRIM17Q9Y577 477 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 RAMP2O60895 175 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 EPN2O95208 641 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 SLC1A6P48664 564 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 LGALS3BPQ08380 585 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.25
NEK9-201ENST00000238616 IL27RAQ6UWB1 636 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 USP45Q70EL2 814 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 GPATCH2LQ9NWQ4 482 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 BTN3A3O00478 584 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TPD52L2O43399 206 aaKnown RBP13.46□□□□□ -0.25
NEK9-201ENST00000238616 THRAP10827 490 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 HSD3B2P26439 372 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 HOXC12P31275 282 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 RPL9P32969 192 aaKnown RBP13.46□□□□□ -0.25
NEK9-201ENST00000238616 TUBP50607 506 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TBCELQ5QJ74 424 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 CHST13Q8NET6 341 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 TINF2Q9BSI4 451 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 ING3Q9NXR8 418 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 ZNF222Q9UK12 451 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 COG5Q9UP83 839 aa13.46□□□□□ -0.25
NEK9-201ENST00000238616 ADGRA3Q8IWK6 1321 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 ATP5F1P24539 256 aaPredicted RBP13.46□□□□□ -0.26
NEK9-201ENST00000238616 STARP49675 285 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 DSELQ8IZU8 1212 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 ZNF655Q8N720 491 aaPredicted RBP13.46□□□□□ -0.26
NEK9-201ENST00000238616 BDH2Q9BUT1 245 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 VHLP40337 213 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 KLHL12Q53G59 568 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 RASSF6Q6ZTQ3 369 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.26
NEK9-201ENST00000238616 RBAK-RBAKDNI3L0D1 243 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 GLRA3O75311 464 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 CCND1P24385 295 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 COILP38432 576 aaPredicted RBP13.45□□□□□ -0.26
NEK9-201ENST00000238616 POLD2P49005 469 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 AQP5P55064 265 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 NSUN4Q96CB9 384 aaKnown RBP13.45□□□□□ -0.26
NEK9-201ENST00000238616 TAAR1Q96RJ0 339 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 PHF11Q9UIL8 331 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 SHANK2Q9UPX8 1470 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 NFKB1P19838 968 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 BCL2L1Q07817 233 aa13.45□□□□□ -0.26
NEK9-201ENST00000238616 RASA2Q15283 850 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms