RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 YBX3P16989 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 ATXN3P54252 364 aaPredicted RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 POLE2P56282 527 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 MRPS35P82673 323 aaKnown RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 TBCCQ15814 346 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 LRRC74BQ6ZQY2 392 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 RINLQ6ZS11 566 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 ASRGL1Q7L266 308 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 THEM5Q8N1Q8 247 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 OR6P1Q8NGX9 317 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SCG3Q8WXD2 468 aaKnown RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 KATNAL1Q9BW62 490 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 DUSP16Q9BY84 665 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 EBF2Q9HAK2 575 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 CDHR5Q9HBB8 845 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 EURLQ9NYK6 297 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 BCAP29Q9UHQ4 241 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SOX13Q9UN79 622 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 EVPLQ92817 2033 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 UBTFL6P0CB48 400 aaPredicted RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 PAX7P23759 505 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 CRHR1P34998 444 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 NUMBP49757 651 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SLC25A3Q00325 362 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SNX17Q15036 470 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 PDPK2PQ6A1A2 396 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 TRNP1Q6NT89 227 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 MIEF2Q96C03 454 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 SERPINI1Q99574 410 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 NACA2Q9H009 215 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 TSPYL2Q9H2G4 693 aaPredicted RBP15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 CACNG4Q9UBN1 327 aa15.33■□□□□ 0.04
UBE2D4-201ENST00000222402 TREHO43280 583 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PEX11AO75192 247 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 SLC4A1P02730 911 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 LTFP02788 710 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 TPBGLP0DKB5 382 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PAMP19021 973 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 AXLP30530 894 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 GRIK1P39086 918 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PLEKHG4Q58EX7 1191 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 USP50Q70EL3 339 aaPredicted RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 CLPTM1LQ96KA5 538 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 HBS1LQ9Y450 684 aaKnown RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 DCXO43602 365 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 CRCPO75575 148 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PDE5AO76074 875 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 FBXO21O94952 628 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 NEK3P51956 506 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 POU6F1Q14863 301 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 ARHGAP17Q68EM7 881 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 KCNMB4Q86W47 210 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 C10orf107Q8IVU9 208 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 TSC22D3Q99576 134 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 TKTL2Q9H0I9 626 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 ENO4A6NNW6 628 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 F9P00740 461 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 SERPINB5P36952 375 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 TRMT5Q32P41 509 aaKnown RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 RBM15BQ8NDT2 890 aaKnown RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 SLC7A6OSQ96CW6 309 aaPredicted RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 C7orf26Q96N11 449 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 CPNE1Q99829 537 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 C16orf70Q9BSU1 422 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 ILKAPQ9H0C8 392 aaPredicted RBP15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 IPPQ9Y573 584 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 DOCK5Q9H7D0 1870 aa15.32■□□□□ 0.04
UBE2D4-201ENST00000222402 E7ENQ6 273 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 TIMM44O43615 452 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 ENO3P13929 434 aaPredicted RBP15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 KPNA2P52292 529 aaKnown RBP15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 LILRA4P59901 499 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 SPANXN3Q5MJ09 141 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 GRTP1Q5TC63 336 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 NCBP2-AS2Q69YL0 99 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 TAPT1Q6NXT6 567 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 ARCQ7LC44 396 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 SIGLEC10Q96LC7 697 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 FAM193BQ96PV7 902 aaPredicted RBP15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 APBA2Q99767 749 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 MAN1C1Q9NR34 630 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 PNPOQ9NVS9 261 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 OR12D3Q9UGF7 316 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 DNAJC25-GNG10A0A024R161 153 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 PROCP04070 461 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 LHX1P48742 406 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 SLC10A2Q12908 348 aaPredicted RBP15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 LRRC8BQ6P9F7 803 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 ZNF567Q8N184 647 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 VPS39Q96JC1 886 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 ELMO2Q96JJ3 720 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 MAML3Q96JK9 1138 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
UBE2D4-201ENST00000222402 FNDC3AQ9Y2H6 1198 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms