RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 VN1R5Q7Z5H4 357 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 MAGEB18Q96M61 343 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 BBS4Q96RK4 519 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 ANKRD63C9JTQ0 380 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 UBDO15205 165 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 BAIAP3O94812 1187 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 CYP1A1P04798 512 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 HSPA13P48723 471 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 ANGPT1Q15389 498 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 STK40Q8N2I9 435 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 ERLEC1Q96DZ1 483 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 PRDM16Q9HAZ2 1276 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 TBC1D12O60347 775 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 HOXB8P17481 243 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 AMD1P17707 334 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 NDUFV1P49821 464 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 CDKAL1Q5VV42 579 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 BNC2Q6ZN30 1099 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF655Q8N720 491 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 C18orf25Q96B23 403 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 CCT7Q99832 543 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 COPG1Q9Y678 874 aaKnown RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 A8MX80 341 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 MGAT1P26572 445 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 MIPP30301 263 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 ELMO3Q96BJ8 720 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 E9PBE3 544 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 MAPK8P45983 427 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 PCYT1AP49585 367 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 AQP5P55064 265 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 TTC33Q6PID6 262 aaPredicted RBP19.33■□□□□ 0.69
SMPD3-201ENST00000219334 KCNT2Q6UVM3 1135 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 PLPPR4Q7Z2D5 763 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 OR56A4Q8NGH8 313 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 SPATA20Q8TB22 786 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 DEFB118Q96PH6 123 aa19.33■□□□□ 0.69
SMPD3-201ENST00000219334 UNKQ9C0B0 810 aaKnown RBP19.33■□□□□ 0.69
SMPD3-201ENST00000219334 WDR27A2RRH5 827 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 PIK3CGP48736 1102 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 VPS33AQ96AX1 596 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 AVENQ9NQS1 362 aaPredicted RBP19.33■□□□□ 0.68
SMPD3-201ENST00000219334 NPR3P17342 541 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 LRRC34Q8IZ02 419 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 GRIN3AQ8TCU5 1115 aa19.33■□□□□ 0.68
SMPD3-201ENST00000219334 PDE2AO00408 941 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CATP04040 527 aaKnown RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 GLRA2P23416 452 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 MILR1Q7Z6M3 343 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 REXO1L1PQ8IX06 675 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CRYL1Q9Y2S2 319 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 SLIT1O75093 1534 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 H3BMM5 538 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 NUDT14O95848 222 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CCND1P24385 295 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 ELK3P41970 407 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 LLGL2Q6P1M3 1020 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 WDR59Q6PJI9 974 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 NECAB2Q7Z6G3 386 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 RNF19AQ9NV58 838 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 TM9SF1O15321 606 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 GUCY1B2O75343 617 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 TRUB2O95900 331 aaKnown RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CNPP09543 421 aaKnown RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 DEFA1P59665 94 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 DEFA3P59666 94 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 GSTA3Q16772 222 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 NOL9Q5SY16 702 aaKnown RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 DPP10Q8N608 796 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 PPP1R14AQ96A00 147 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 OSBPL6Q9BZF3 934 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 OR12D3Q9UGF7 316 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 ZC3H13Q5T200 1668 aaKnown RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 MAFO75444 373 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 ABCB1P08183 1280 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 SLC12A3P55017 1021 aa19.32■□□□□ 0.68
SMPD3-201ENST00000219334 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD3-201ENST00000219334 CD52P31358 61 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 RPL9P32969 192 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 KLC1Q07866 573 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 C16orf72Q14CZ0 275 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 METTL6Q8TCB7 284 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 CPNE1Q99829 537 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 KLHL41O60662 606 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 GPR15P49685 360 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 MRPS15P82914 257 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 CCDC153Q494R4 210 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 HSFY1Q96LI6 401 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 LACRTQ9GZZ8 138 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 ST3GAL5Q9UNP4 418 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 HES2Q9Y543 173 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 GNA13Q14344 377 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 AGKQ53H12 422 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 PAGE2BQ5JRK9 111 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 RAP1GAP2Q684P5 730 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms