RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CREB1P16220 341 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 PTPN3P26045 913 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 RTP2Q5QGT7 225 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 LRRC8BQ6P9F7 803 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 ZNF534Q76KX8 674 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 CPLX4Q7Z7G2 160 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 SPATS2Q86XZ4 545 aaKnown RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 PDCD7Q8N8D1 485 aaKnown RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 ANKRD42Q8N9B4 389 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 NETO2Q8NC67 525 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 SGSM3Q96HU1 749 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 FCRL2Q96LA5 508 aaPredicted RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 EBNA1BP2Q99848 306 aaKnown RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 CRISPLD2Q9H0B8 497 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 GMIPQ9P107 970 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 HCSTQ9UBK5 93 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 NR2E3Q9Y5X4 410 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 MAD1L1Q9Y6D9 718 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 PLXNA3P51805 1871 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 IQANK1A0A1B0GTG1 560 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 FAM47DPA6NHR8 397 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 KCNU1A8MYU2 1149 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 KCNK1O00180 336 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 HAPLN1P10915 354 aaPredicted RBP17.87■□□□□ 0.45
VRK1-201ENST00000216639 PSMB4P28070 264 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 HOXC13P31276 330 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 RFC2P35250 354 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 PGFP49763 221 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 SLC18A1P54219 525 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 NRG1Q02297 640 aaPredicted RBP17.87■□□□□ 0.45
VRK1-201ENST00000216639 EFTUD2Q15029 972 aaKnown RBP eCLIP17.87■□□□□ 0.455e-7■■■□□ 16.3
VRK1-201ENST00000216639 FAM182AQ5T1J6 154 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 FOXR1Q6PIV2 292 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 TAX1BP1Q86VP1 789 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 CCNJLQ8IV13 435 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 TP53INP2Q8IXH6 220 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 MGARPQ8TDB4 240 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 C1orf74Q96LT6 269 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 OSER1Q9NX31 292 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 SLC27A5Q9Y2P5 690 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 SCN5AQ14524 2016 aa17.87■□□□□ 0.45
VRK1-201ENST00000216639 PRPF4O43172 522 aaKnown RBP eCLIP17.86■□□□□ 0.45
VRK1-201ENST00000216639 UPP2O95045 317 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 APOEP02649 317 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 INHBAP08476 426 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 TBX4P57082 545 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 USP46P62068 366 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 USP41Q3LFD5 358 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 KBTBD12Q3ZCT8 623 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 RNF19BQ6ZMZ0 732 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 MICALCLQ6ZW33 695 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 AGGF1Q8N302 714 aaeCLIP17.86■□□□□ 0.45
VRK1-201ENST00000216639 TTC9BQ8N6N2 239 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 GSDMBQ8TAX9 411 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 DCAKDQ8WVC6 231 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 SIGLEC10Q96LC7 697 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 CEP295NLQ96MC4 621 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 CEP41Q9BYV8 373 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 SSU72Q9NP77 194 aaKnown RBP17.86■□□□□ 0.45
VRK1-201ENST00000216639 NUDT5Q9UKK9 219 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 SDR42E2A6NKP2 422 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 ERI2A8K979 691 aaKnown RBP17.86■□□□□ 0.45
VRK1-201ENST00000216639 FOXO6A8MYZ6 492 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 MOCS2O96007 188 aaPredicted RBP17.86■□□□□ 0.45
VRK1-201ENST00000216639 PBX3P40426 434 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 IFNAR2P48551 515 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 LGSNQ5TDP6 509 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 MANEALQ5VSG8 457 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 SLC44A1Q8WWI5 657 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 STAMBPL1Q96FJ0 436 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 NAT9Q9BTE0 207 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 NSRP1Q9H0G5 558 aaKnown RBP17.86■□□□□ 0.45
VRK1-201ENST00000216639 TMEM39AQ9NV64 488 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 DONSONQ9NYP3 566 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 ATP11BQ9Y2G3 1177 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 CDY1Q9Y6F8 540 aa17.86■□□□□ 0.45
VRK1-201ENST00000216639 ZNF638Q14966 1978 aaKnown RBP17.86■□□□□ 0.45
VRK1-201ENST00000216639 FNDC1Q4ZHG4 1894 aaPredicted RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 CCNCP24863 283 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 TUBP50607 506 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 PRPSAP1Q14558 356 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 LRRC14Q15048 493 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 TEX44Q53QW1 395 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 ACBD5Q5T8D3 534 aaPredicted RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 GKAP1Q5VSY0 366 aaPredicted RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.85■□□□□ 0.457e-9■□□□□ 9.8
VRK1-201ENST00000216639 SLC26A11Q86WA9 606 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 TMEM173Q86WV6 379 aaPredicted RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 LRRC6Q86X45 466 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 ATPAF2Q8N5M1 289 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 ATP6V0D2Q8N8Y2 350 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 STKLD1Q8NE28 680 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 FBXO22Q8NEZ5 403 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 ALKBH8Q96BT7 664 aaKnown RBP17.85■□□□□ 0.45
VRK1-201ENST00000216639 SLC39A13Q96H72 371 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 GBA3Q9H227 469 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 FNIP2Q9P278 1114 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 TBX21Q9UL17 535 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms