RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC4A5Q9BY07 1137 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 GAREM1Q9H706 876 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 FBRSQ9HAH7 460 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 ACP6Q9NPH0 428 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 SUN2Q9UH99 717 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 XPO7Q9UIA9 1087 aaKnown RBP15.55■□□□□ 0.08
UPK3A-201ENST00000216211 INTS6Q9UL03 887 aaKnown RBP15.55■□□□□ 0.08
UPK3A-201ENST00000216211 NEUROG3Q9Y4Z2 214 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 CHD6Q8TD26 2715 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 PLXNB3Q9ULL4 1909 aa15.55■□□□□ 0.08
UPK3A-201ENST00000216211 E5RJQ4 531 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 CAPN9O14815 690 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 PAPSS1O43252 624 aaPredicted RBP15.54■□□□□ 0.08
UPK3A-201ENST00000216211 THAP12O43422 761 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 MED7O43513 233 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 SEMA4FO95754 770 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 C7P10643 843 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 GNA15P30679 374 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 RDXP35241 583 aaKnown RBP15.54■□□□□ 0.08
UPK3A-201ENST00000216211 CSKP41240 450 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 MATKP42679 507 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 ST8SIA6P61647 398 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 NNTQ13423 1086 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 DCAF6Q58WW2 860 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 FSCBQ5H9T9 825 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 MS4A13Q5J8X5 152 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 CREBRFQ8IUR6 639 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 ZNF557Q8N988 423 aaPredicted RBP15.54■□□□□ 0.08
UPK3A-201ENST00000216211 KDF1Q8NAX2 398 aaPredicted RBP15.54■□□□□ 0.08
UPK3A-201ENST00000216211 BTBD1Q9H0C5 482 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 PCED1AQ9H1Q7 454 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 TSPY26PQ9H489 355 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 TJP2Q9UDY2 1190 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 MSRB2Q9Y3D2 182 aa15.54■□□□□ 0.08
UPK3A-201ENST00000216211 A0A1B0GVT2 93 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 H0Y626 953 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 SART1O43290 800 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 SIN3BO75182 1162 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 LUC7L3O95232 432 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 TRIM16O95361 564 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 FGFR1OPO95684 399 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 CER1O95813 267 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 SLC9A1P19634 815 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 CTSOP43234 321 aaPredicted RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 CSNK1EP49674 416 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 PITX1P78337 314 aaPredicted RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 APBA1Q02410 837 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ZBTB16Q05516 673 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 CDH18Q13634 790 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ARHGAP44Q17R89 818 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ZNF423Q2M1K9 1284 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 HLA-BQ31612 363 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 TTC31Q49AM3 519 aaPredicted RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ZC3H12AQ5D1E8 599 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 PITRM1Q5JRX3 1037 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 RAP1GAP2Q684P5 730 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ZNF776Q68DI1 518 aaPredicted RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 TRIM65Q6PJ69 517 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 BEND5Q7L4P6 421 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 DHX40Q8IX18 779 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 LGI2Q8N0V4 545 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 STK32AQ8WU08 396 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 MRGPRX3Q96LB0 322 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 FUCA2Q9BTY2 467 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 POPDC2Q9HBU9 364 aa15.53■□□□□ 0.08
UPK3A-201ENST00000216211 FNDC3AQ9Y2H6 1198 aaKnown RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.53■□□□□ 0.08
UPK3A-201ENST00000216211 TMEM8BA6NDV4 472 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 BECN2A8MW95 431 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 FSBPO95073 299 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TRUB2O95900 331 aaKnown RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 APOEP02649 317 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 ASLP04424 464 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 FTH1P19P0C7X4 201 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TACR2P21452 398 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 USP8P40818 1118 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TAF5Q15542 800 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 CAMK4Q16566 473 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 MEA1Q16626 185 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 IL27RAQ6UWB1 636 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 RAB44Q7Z6P3 723 aaPredicted RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TMEM110Q86TL2 294 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 CHSY1Q86X52 802 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 CCDC117Q8IWD4 279 aaPredicted RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 PNPLA1Q8N8W4 532 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 SETD7Q8WTS6 366 aaKnown RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 BIRC7Q96CA5 298 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 MED15Q96RN5 788 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 RBSNQ9H1K0 784 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 RSPH9Q9H1X1 276 aaPredicted RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 SGK2Q9HBY8 427 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TM9SF3Q9HD45 589 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TM7SF3Q9NS93 570 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 KIAA1468Q9P260 1216 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 RWDD2AQ9UIY3 292 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 RALYQ9UKM9 306 aaKnown RBP15.52■□□□□ 0.08
UPK3A-201ENST00000216211 PCOLCE2Q9UKZ9 415 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 ERVW-1Q9UQF0 538 aa15.52■□□□□ 0.08
UPK3A-201ENST00000216211 TTC34A8MYJ7 566 aa15.51■□□□□ 0.07
UPK3A-201ENST00000216211 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms