RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 ADGRE1Q14246 886 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 TAZQ16635 292 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 KLHL35Q6PF15 583 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 LAYNQ6UX15 382 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 ABHD15Q6UXT9 468 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 TSPAN14Q8NG11 270 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 DOLKQ9UPQ8 538 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 CDY2AQ9Y6F7 541 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 CDY1Q9Y6F8 540 aa20.58■□□□□ 0.89
PPP1R3F-201ENST00000055335 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 LTFP02788 710 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SUPT20HL2P0C7V6 817 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SDC4P31431 198 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SUPT20HL1Q3ZLR7 823 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 NSUN6Q8TEA1 469 aaKnown RBP20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SCYL1Q96KG9 808 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 DNAJC28Q9NX36 388 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SNX13Q9Y5W8 968 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 PDLIM1O00151 329 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 ATG7O95352 703 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SETSIPP0DME0 302 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 CEACAM7Q14002 265 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 MRPL4Q9BYD3 311 aaKnown RBP20.58■□□□□ 0.88
PPP1R3F-201ENST00000055335 DENRO43583 198 aaKnown RBP20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 PEX10O60683 326 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 THRAP10827 490 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZNF410Q86VK4 478 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 PCDHAC1Q9H158 963 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 SNX15Q9NRS6 342 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 ARHGEF37A1IGU5 675 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 CASQ2O14958 399 aaPredicted RBP20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 PRKCBP05771 671 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 CDH5P33151 784 aaPredicted RBP20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 PSMD7P51665 324 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 NR1H2P55055 460 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 C7orf31Q8N865 590 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 GPRASP2Q96D09 838 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 TMEM79Q9BSE2 394 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 CDH19Q9H159 772 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 XYLT2Q9H1B5 865 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 WDR41Q9HAD4 459 aa20.57■□□□□ 0.88
PPP1R3F-201ENST00000055335 WDR46O15213 610 aaKnown RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 OGTO15294 1046 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 ETFBP38117 255 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 CCR3P51677 355 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 MCCD1P59942 119 aaPredicted RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 FSTL1Q12841 308 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 LPIN1Q14693 890 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 DCLK2Q8N568 766 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 CCNYL1Q8N7R7 359 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 ERLEC1Q96DZ1 483 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 APOL2Q9BQE5 337 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 ATP5BP06576 529 aaKnown RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 NFICP08651 508 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 CDH2P19022 906 aaPredicted RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 AVPR1AP37288 418 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 LSM12Q3MHD2 195 aaKnown RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 SLC9A4Q6AI14 798 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 C16orf89Q6UX73 402 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 COLGALT1Q8NBJ5 622 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 PDCD6IPQ8WUM4 868 aaKnown RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 TMEM176AQ96HP8 235 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 SYBUQ9NX95 663 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 ADGRA2Q96PE1 1338 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 CCDC14Q49A88 953 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 IL23RQ5VWK5 629 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 IL31Q6EBC2 164 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 STRA8Q7Z7C7 330 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 CDKL3Q8IVW4 592 aaPredicted RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 RDM1Q8NG50 284 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 AGAP2Q99490 1192 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 FERMT1Q9BQL6 677 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 FRMD8Q9BZ67 464 aaPredicted RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 EPS15L1Q9UBC2 864 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 RSL24D1Q9UHA3 163 aaKnown RBP20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 RAB26Q9ULW5 256 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 SYNPO2Q9UMS6 1093 aa20.56■□□□□ 0.88
PPP1R3F-201ENST00000055335 C2CD4BA6NLJ0 364 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZNF195O14628 629 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 RNASEH2AO75792 299 aaKnown RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 CCDC166P0CW27 439 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 EEF1DP3Q658K8 133 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 TRIM50Q86XT4 487 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 SPATA6LQ8N4H0 392 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 DNAAF3Q8N9W5 541 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 DIS3LQ8TF46 1054 aaKnown RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZNF669Q96BR6 464 aaPredicted RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 LRRC39Q96DD0 335 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 KLHL32Q96NJ5 620 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 TSPAN16Q9UKR8 245 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 FUT4P22083 530 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 GPD2P43304 727 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 ENTPD1P49961 510 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 MAPK10P53779 464 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 CYP4V2Q6ZWL3 525 aaPredicted RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 PYROXD2Q8N2H3 581 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 CIB1Q99828 191 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms