RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HMX2A2RU54 273 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 GCATO75600 419 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 NEK3P51956 506 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 BST1Q10588 318 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 FSCN1Q16658 493 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 CES4AQ5XG92 561 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 C3orf58Q8NDZ4 430 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 SKA1Q96BD8 255 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 SENP8Q96LD8 212 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 QKIQ96PU8 341 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTNS-201ENST00000046640 PHACTR1Q9C0D0 580 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 SLC45A1Q9Y2W3 748 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 I6L893 689 aaPredicted RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 XPO1O14980 1071 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 RFPL1O75677 317 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 NCAM1P13591 858 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 ABCG1P45844 678 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 AQP5P55064 265 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 SLC34A1Q06495 639 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 UBAP2LQ14157 1087 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 GNASQ5JWF2 1037 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 PID1Q7Z2X4 250 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 USP6NLQ92738 828 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 APOL2Q9BQE5 337 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ZSWIM8A7E2V4 1837 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 XPOTO43592 962 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 AP1G2O75843 785 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 KCNE1P15382 129 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ACADSP16219 412 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 PNPLA4P41247 253 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ACADSBP45954 432 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 CRYBB1P53674 252 aaPredicted RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 MRPS35P82673 323 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 MORN1Q5T089 497 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 HIPK4Q8NE63 616 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 GSDMBQ8TAX9 411 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 TLE6Q9H808 572 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 SSU72Q9NP77 194 aaKnown RBP13.5□□□□□ -0.25
CTNS-201ENST00000046640 UBP1Q9NZI7 540 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 ST3GAL5Q9UNP4 418 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 PSAT1Q9Y617 370 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 USP3Q9Y6I4 520 aa13.5□□□□□ -0.25
CTNS-201ENST00000046640 EEF2KO00418 725 aaKnown RBP13.49□□□□□ -0.25
CTNS-201ENST00000046640 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
CTNS-201ENST00000046640 CPT1AP50416 773 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 SCNN1GP51170 649 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 CDC42EP1Q00587 391 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 SLC18A2Q05940 514 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 NUDCD3Q8IVD9 361 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
CTNS-201ENST00000046640 PCED1BQ96HM7 432 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
CTNS-201ENST00000046640 C20orf27Q9GZN8 174 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 A0A0A0MRY4 1105 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 SPAG6O75602 509 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 POMCP01189 267 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 FYNP06241 537 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 FAM200BP0CF97 657 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 ERVK-10P10266 1014 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 ZFXP17010 805 aaPredicted RBP13.49□□□□□ -0.25
CTNS-201ENST00000046640 PPP2R5DQ14738 602 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 CST9Q5W186 159 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 STRADAQ7RTN6 431 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 CCNJLQ8IV13 435 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 POU5F2Q8N7G0 328 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 GSTCDQ8NEC7 633 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 SPATA13Q96N96 652 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 SH3GL3Q99963 347 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
CTNS-201ENST00000046640 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 MAP3K7O43318 606 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 SKIP12755 728 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 PRKCHP24723 683 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 AXLP30530 894 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 NR2C2P49116 596 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 HSF5Q4G112 596 aaPredicted RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 ZNF567Q8N184 647 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 PPP1R14CQ8TAE6 165 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 E2F7Q96AV8 911 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 PLLPQ9Y342 182 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 ZNF638Q14966 1978 aaKnown RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 LYPLA1O75608 230 aaPredicted RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 DGKIO75912 1065 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 NOS2P35228 1153 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms