RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 HNRNPA1L2Q32P51 320 aaKnown RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 SYPL2Q5VXT5 272 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 NAXDQ8IW45 347 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 MFN1Q8IWA4 741 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 BAHD1Q8TBE0 780 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 MYEOVQ96EZ4 313 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 MIS12Q9H081 205 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 BTBD1Q9H0C5 482 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 INTS2Q9H0H0 1204 aaKnown RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 C6orf106Q9H6K1 298 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 POPDC2Q9HBU9 364 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 CYTH4Q9UIA0 394 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 PCOLCE2Q9UKZ9 415 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 ARID1BQ8NFD5 2236 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 TARSL2A2RTX5 802 aaKnown RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 DKK1O94907 266 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 SEMA4FO95754 770 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 DNTTP04053 509 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 SRPRAP08240 638 aaKnown RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 MATKP42679 507 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 RPS24P62847 133 aaKnown RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 HLA-BQ31612 363 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 ZNF776Q68DI1 518 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 DENND1BQ6P3S1 775 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 ZNF366Q8N895 744 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 BIRC7Q96CA5 298 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 CAMK1GQ96NX5 476 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 MED15Q96RN5 788 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 ORAI3Q9BRQ5 295 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 MIR1-1HGQ9H1L0 117 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 GAREM1Q9H706 876 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 UBE2TQ9NPD8 197 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-201ENST00000013807 KLK13Q9UKR3 277 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 DOCK4Q8N1I0 1966 aa16.45■□□□□ 0.22
ERCC1-201ENST00000013807 GTPBP10A4D1E9 387 aaKnown RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 BIN1O00499 593 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 GLI1P08151 1106 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 CD27P26842 260 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 CSKP41240 450 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 GRIA4P48058 902 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 STX17P56962 302 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 SFSWAPQ12872 951 aaKnown RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 SLC12A1Q13621 1099 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 TTC31Q49AM3 519 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 DCAF6Q58WW2 860 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 C9orf64Q5T6V5 341 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 TAC4Q86UU9 113 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 CHCHD4Q8N4Q1 142 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 NUCKS1Q9H1E3 243 aaKnown RBP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 TM7SF3Q9NS93 570 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.44■□□□□ 0.22
ERCC1-201ENST00000013807 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 RWDD2AQ9UIY3 292 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 PCDHB9Q9Y5E1 797 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 SLCO1B1Q9Y6L6 691 aa16.44■□□□□ 0.22
ERCC1-201ENST00000013807 COL5A1P20908 1838 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 BECN2A8MW95 431 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 E5RJQ4 531 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 TRUB2O95900 331 aaKnown RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 KRT5P13647 590 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 GNA15P30679 374 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 CSNK1EP49674 416 aaKnown RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 PLK1P53350 603 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 ST8SIA6P61647 398 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 PITRM1Q5JRX3 1037 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 FAM124AQ86V42 546 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 WDTC1Q8N5D0 677 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 PRMT1Q99873 361 aaKnown RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 PABPC3Q9H361 631 aaKnown RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 IL21RQ9HBE5 538 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 TM9SF3Q9HD45 589 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 STIM2Q9P246 746 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 PCDHGC3Q9UN70 934 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 ERVW-1Q9UQF0 538 aa16.43■□□□□ 0.22
ERCC1-201ENST00000013807 FNDC3AQ9Y2H6 1198 aaKnown RBP16.43■□□□□ 0.22
ERCC1-201ENST00000013807 A0A1B0GVT2 93 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CAPN9O14815 690 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 FLRT2O43155 660 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 SIN3BO75182 1162 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 APOEP02649 317 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 IGHV4-34P06331 123 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 FTH1P19P0C7X4 201 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms