RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Rnaseh2aQ9CWY8 301 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tbx20Q9ES03 445 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ap3m1Q9JKC8 418 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tnrc6bQ8BKI2 1810 aaKnown RBP11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Grik3B1AS29 919 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Cyp2c69E9PXC3 491 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 2610008E11RikG3X964 669 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 H2-AaP01910 256 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Cyp2c40P56657 491 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Nab1Q61122 486 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Q6GQV0 436 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 PoliQ6R3M4 717 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Phf24Q80TL4 400 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 TufmQ8BFR5 452 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Gsdmc3Q8CB12 480 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Slc39a3Q99K24 317 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tmed11Q9D2R4 215 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Nudt5Q9JKX6 218 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 CltcQ68FD5 1675 aaKnown RBP11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 1700003F12RikA2AKE5 210 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 AvilO88398 819 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Nr0b1Q61066 472 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mib1Q80SY4 1006 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Rbm22Q8BHS3 420 aaKnown RBP11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Alg3Q8K2A8 438 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Olfr330Q8VGD9 315 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Akr1c21Q91WR5 323 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ndfip2Q91ZP6 311 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Rnft1Q9DCN7 395 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 B3galt4Q9Z0F0 371 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Siah3B2RWG3 268 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Gm17175E9Q528 179 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 PbsnO08976 174 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Stk16O88697 305 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mkrn3Q60764 544 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Zdhhc17Q80TN5 632 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Luzp2Q8BGY3 345 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Arhgap12Q8C0D4 838 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Sfrp1Q8C4U3 314 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Trappc12Q8K2L8 797 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Necab2Q91ZP9 389 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Sh3bp5lQ99LH9 392 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Efhd2Q9D8Y0 240 aaKnown RBP11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Hipk3Q9ERH7 1192 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ak1Q9R0Y5 194 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Trip6Q9Z1Y4 480 aa11.1□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ripor3A1L3T7 938 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Larp7Q05CL8 570 aaKnown RBP11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Glt6d1Q2NKH9 311 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 FdxrQ61578 494 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Dusp4Q8BFV3 398 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mgat5Q8R4G6 740 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 WwoxQ91WL8 414 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Dnajc5bQ9CQ94 199 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mss51Q9D5Z5 446 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Celf5D3Z4T1 395 aaKnown RBP11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Gm5799E9Q2M1 201 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Grin2cQ01098 1239 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Aak1Q3UHJ0 959 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 RragdQ7TT45 449 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mfn1Q811U4 741 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tspan9Q8BJU2 239 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Fbxo38Q8BMI0 1194 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Snapc1Q8K0S9 389 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Dlgap1Q9D415 992 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tex22Q9D9U4 189 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Prrg1A2BFE8 218 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tmem245B1AZA5 876 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 LtfP08071 707 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mcpt1P11034 246 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Psmd7P26516 321 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Tbc1d10aP58802 500 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Frg1P97376 258 aaKnown RBP11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ppp4cP97470 307 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Pcnx4Q3UVY5 1174 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Myl6Q60605 151 aaKnown RBP11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Atg16l2Q6KAU8 623 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 SyncripQ7TMK9 623 aaKnown RBP11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Reep1Q8BGH4 201 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 HlfQ8BW74 295 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Exo5Q9CXP9 373 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Fbxl16A2RT62 479 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Vmn2r46L7N282 809 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Zmym5Q3U2E2 627 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Shroom1Q5SX79 823 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Fam149b1Q6NSV7 578 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 HpseQ6YGZ1 535 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Atp2c1Q80XR2 918 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Epb41l5Q8BGS1 731 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Cdkn2aipQ8BI72 563 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 FsbpQ8BKE5 299 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Lpcat2Q8BYI6 544 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Pgm5Q8BZF8 567 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Anapc2Q8BZQ7 837 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Armcx6Q8K3A6 301 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Adam32Q8K410 754 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Mcfd2Q8K5B2 145 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Snap47Q8R570 413 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Use1Q9CQ56 270 aa11.09□□□□□ -0.63
Sptan1-204ENSMUST00000113717 Ssxb9A2BI93 185 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms