RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 DbhQ64237 622 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sp140Q6NSQ5 534 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Chsy1Q6ZQ11 800 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Acad9Q8JZN5 625 aaKnown RBP8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rprd1aQ8VDS4 312 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sec63Q8VHE0 760 aaKnown RBP8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp617Q91WM0 559 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cybrd1Q925G2 290 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam173bQ9D1Z3 247 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cyp4v2Q9DBW0 525 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nmnat1Q9EPA7 285 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pex11bQ9Z210 259 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Iqcj-Schip1A0A088MLT8 559 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp985A2A7A5 519 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Siah3B2RWG3 268 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccdc170D3YXL0 722 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vmn1r39G3UWE6 305 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Schip1P0DPB4 484 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Htr2cP34968 459 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Kcnn2P58390 839 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pyroxd1Q3TMV7 498 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 March9Q3TZ87 348 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Mylk3Q3UIZ8 795 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arglu1Q3UL36 271 aaKnown RBP8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Kdm7aQ3UWM4 940 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Psg28Q4KL66 472 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arhgap26Q6ZQ82 814 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc39a4Q78IQ7 660 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Baiap2l2Q80Y61 522 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Crlf2Q8CII9 359 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Caap1Q8VDY9 356 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 PlvapQ91VC4 438 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pde6cQ91ZQ1 861 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cpt1bQ924X2 772 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Smarcb1Q9Z0H3 385 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Numa1E9Q7G0 2094 aaKnown RBP8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm6588E9Q3K0 461 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 BC024978J3QPC3 361 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Exoc7O35250 697 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Camk4P08414 469 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Irf7P70434 457 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 RnaselQ05921 735 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rcsd1Q3UZA1 412 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fbxo39Q5NBU5 443 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Casd1Q7TN73 797 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vipas39Q8BGQ1 491 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pcdha1Q91Y21 948 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cog2Q921L5 731 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc12a6Q924N4 1150 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 NfkbizQ9EST8 728 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 P01648 108 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ptpn1P35821 432 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Stat5aP42230 793 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Anp32eP97822 260 aaKnown RBP8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 AxlQ00993 888 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Col6a1Q04857 1025 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Atp8b1Q148W0 1251 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 PomkQ3TUA9 349 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pik3r5Q5SW28 871 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 PnocQ64387 187 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rbl2Q64700 1135 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arhgef18Q6P9R4 1021 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfr698Q7TRN4 311 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gpr62Q80UC6 358 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pdk1Q8BFP9 434 aaKnown RBP8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ticam2Q8BJQ4 232 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc41a2Q8BYR8 573 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gramd4Q8CB44 633 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 FgbQ8K0E8 481 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 HpdlQ8K248 371 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Mkl1Q8K4J6 964 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Alg1Q921Q3 482 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 4930449I24RikQ9D5E3 319 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 PrccQ9EQC8 491 aaKnown RBP8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc40a1Q9JHI9 570 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 MefvQ9JJ26 767 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 AuhQ9JLZ3 314 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tubd1Q9R1K7 455 aa8.95□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dpysl2O08553 572 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 P01631 113 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 SykP48025 629 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Aars2Q14CH7 980 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Brms1lQ3U1T3 323 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 TceancQ3US16 359 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Foxred2Q3USW5 665 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Itga1Q3V3R4 1179 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lrrc47Q505F5 581 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sec23ipQ6NZC7 998 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam185aQ7TPD2 378 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zbtb41Q811F1 908 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Epb41l5Q8BGS1 731 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Il17reQ8BH06 637 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Chmp2bQ8BJF9 213 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc25a3Q8VEM8 357 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Mgrn1Q9D074 532 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rnf186Q9D241 226 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cwc15Q9JHS9 229 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 QkiQ9QYS9 341 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gbf1Q6DFZ1 1861 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam171a1A2ATK9 892 aa8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms