RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZNF398Q8TD17 642 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 TSSK1BQ9BXA7 367 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 IQCGQ9H095 443 aaKnown RBP17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PADI3Q9ULW8 664 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PLLPQ9Y342 182 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-211ENST00000641213 C2CD2LO14523 706 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 MGEA5O60502 916 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ALDH1A2O94788 518 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 TROVE2P10155 538 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHGDH-211ENST00000641213 BGNP21810 368 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 CD52P31358 61 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 DEPDC1BQ8WUY9 529 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ARHGAP39Q9C0H5 1083 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 CSNK1G1Q9HCP0 422 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 PIH1D1Q9NWS0 290 aaKnown RBP17.56■□□□□ 0.4
PHGDH-211ENST00000641213 DDIT4Q9NX09 232 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ZNF623O75123 536 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ATP6V1G2O95670 118 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 MGAT1P26572 445 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 THPOP40225 353 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 HCAR3P49019 387 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 SERPINB9P50453 376 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 TPI1P60174 286 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 MROH9Q5TGP6 573 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 CASC4Q6P4E1 433 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 NLRP9Q7RTR0 991 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 RFWD2Q8NHY2 731 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ARNTL2Q8WYA1 636 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 MYLPFQ96A32 169 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 CD248Q9HCU0 757 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 TXLNGQ9NUQ3 528 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 MKS1Q9NXB0 559 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 IGSF9Q9P2J2 1179 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 KANSL3Q9P2N6 904 aa17.56■□□□□ 0.4
PHGDH-211ENST00000641213 ODC1P11926 461 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 SESN2P58004 480 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-211ENST00000641213 ICE2Q659A1 982 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 PDZD4Q76G19 769 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-211ENST00000641213 EDEM1Q92611 657 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 COLEC11Q9BWP8 271 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 RRN3Q9NYV6 651 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 RAD54BQ9Y620 910 aa17.55■□□□□ 0.4
PHGDH-211ENST00000641213 FAM155AB1AL88 458 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 KCNK1O00180 336 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 CHUKO15111 745 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 SEPT4O43236 478 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 ADAMTS4O75173 837 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 POMCP01189 267 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 KRT16P08779 473 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 NEFHP12036 1026 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 BRCC3P46736 316 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 NKX3-2P78367 333 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 IFRD2Q12894 506 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 TRIM32Q13049 653 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 RIPK1Q13546 671 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PAN2Q504Q3 1202 aaKnown RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 FAM171BQ6P995 826 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 CD300LGQ6UXG3 332 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PID1Q7Z2X4 250 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PGBD4Q96DM1 585 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 ACBD6Q9BR61 282 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 TRIM55Q9BYV6 548 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 SLC13A1Q9BZW2 595 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 DCTN4Q9UJW0 460 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 KLF11O14901 512 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 ATP5HO75947 161 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 B3GAT3O94766 335 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 F9P00740 461 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 IL1BP01584 269 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 ASGR1P07306 291 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PGAM1P18669 254 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PTPN3P26045 913 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 RAB27AP51159 221 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 NIPAL4Q0D2K0 466 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 DSC3Q14574 896 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 ARL13BQ3SXY8 428 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 BSPRYQ5W0U4 402 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 MARK2Q7KZI7 788 aaKnown RBP17.54■□□□□ 0.4
PHGDH-211ENST00000641213 CCNJLQ8IV13 435 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 NPWQ8N729 165 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 SYBUQ9NX95 663 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 MYO16Q9Y6X6 1858 aa17.54■□□□□ 0.4
PHGDH-211ENST00000641213 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-211ENST00000641213 TGDSO95455 350 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 CYP11A1P05108 521 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 BDNFP23560 247 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 CNTFP26441 200 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 CXCR3P49682 368 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 FCGRTP55899 365 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 PPIDQ08752 370 aaKnown RBP17.53■□□□□ 0.4
PHGDH-211ENST00000641213 INTS6LQ5JSJ4 861 aaKnown RBP17.53■□□□□ 0.4
PHGDH-211ENST00000641213 PM20D1Q6GTS8 502 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 TIFABQ6ZNK6 161 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms