RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PDCL3Q9H2J4 239 aa26.14■■□□□ 1.78
VEGFA-232ENST00000640653 SYNCQ9H7C4 482 aa26.14■■□□□ 1.78
VEGFA-232ENST00000640653 FAM204AQ9H8W3 233 aa26.14■■□□□ 1.78
VEGFA-232ENST00000640653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.14■■□□□ 1.782e-7■■■■□ 22.2
VEGFA-232ENST00000640653 PILRBQ9UKJ0 227 aa26.14■■□□□ 1.78
VEGFA-232ENST00000640653 FHOD1Q9Y613 1164 aa26.14■■□□□ 1.78
VEGFA-232ENST00000640653 TPM2P07951 284 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 DLDP09622 509 aaKnown RBP26.13■■□□□ 1.77
VEGFA-232ENST00000640653 SLC2A3P11169 496 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 ITPKAP23677 461 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 CD6P30203 668 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 CD70P32970 193 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 RPS24P62847 133 aaKnown RBP26.13■■□□□ 1.77
VEGFA-232ENST00000640653 LMAN2Q12907 356 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 OR6B2Q6IFH4 312 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 FAM183BPQ6ZVS7 135 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 RABEPKQ7Z6M1 372 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 DEFB106AQ8N104 65 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 ATP6V0D2Q8N8Y2 350 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 CEP76Q8TAP6 659 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 TMEM245Q9H330 911 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 TMEM9BQ9NQ34 198 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 TMEM74BQ9NUR3 256 aa26.13■■□□□ 1.77
VEGFA-232ENST00000640653 USP36Q9P275 1121 aaKnown RBP26.13■■□□□ 1.77
VEGFA-232ENST00000640653 ATXN2Q99700 1313 aaKnown RBP26.13■■□□□ 1.77
VEGFA-232ENST00000640653 TM4SF5O14894 197 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 ACADMP11310 421 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 HLA-EP13747 358 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 COPAP53621 1224 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 IRX4P78413 519 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 CDH18Q13634 790 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 DAB2IPQ5VWQ8 1189 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 CHSY1Q86X52 802 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 CARNMT1Q8N4J0 409 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 CD93Q9NPY3 652 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 ITM2CQ9NQX7 267 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 DDIT4Q9NX09 232 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 TAB2Q9NYJ8 693 aa26.12■■□□□ 1.77
VEGFA-232ENST00000640653 C4orf47A7E2U8 309 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 ERBB2P04626 1255 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 UCHL3P15374 230 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 TACR2P21452 398 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 KCNA4P22459 653 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 OXTRP30559 389 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 PITX1P78337 314 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 EIF4EBP2Q13542 120 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 CAMK2GQ13555 558 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 DUOXA1Q1HG43 343 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 PTPN20Q4JDL3 420 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 RAP1GAP2Q684P5 730 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 SLC23A3Q6PIS1 610 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 SASS6Q6UVJ0 657 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 OLFML1Q6UWY5 402 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 ZDHHC17Q8IUH5 632 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 LGI2Q8N0V4 545 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 TMEM35BQ8NCS4 154 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 OR2T3Q8NH03 318 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 FOXJ1Q92949 421 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 HSPA12BQ96MM6 686 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 NAA15Q9BXJ9 866 aaKnown RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 FBRSQ9HAH7 460 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 PLCB1Q9NQ66 1216 aa26.11■■□□□ 1.77
VEGFA-232ENST00000640653 XPO7Q9UIA9 1087 aaKnown RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 TNRC6BQ9UPQ9 1833 aaKnown RBP26.11■■□□□ 1.77
VEGFA-232ENST00000640653 SYNJ2BP-COX16A0A087WUM0 186 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 KCNU1A8MYU2 1149 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 GRAP2O75791 330 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 CYP11B1P15538 503 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 ABCB4P21439 1286 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 CCR1P32246 355 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 SLC6A3Q01959 620 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 PTPRNQ16849 979 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 SYCP2LQ5T4T6 812 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 CDKAL1Q5VV42 579 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 SLC26A9Q7LBE3 791 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 SLC41A1Q8IVJ1 513 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 CFAP52Q8N1V2 620 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 RNF34Q969K3 372 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 MYEOVQ96EZ4 313 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 ZNF419Q96HQ0 510 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-232ENST00000640653 LMLNQ96KR4 655 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 STK33Q9BYT3 514 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 WSB2Q9NYS7 404 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-232ENST00000640653 COX16Q9P0S2 106 aa26.1■■□□□ 1.77
VEGFA-232ENST00000640653 F5H5T6 163 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 H0Y626 953 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 DAB1O75553 588 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 LUC7L3O95232 432 aaKnown RBP26.09■■□□□ 1.77
VEGFA-232ENST00000640653 ASLP04424 464 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 CFIP05156 583 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 TPMTP51580 245 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 ST8SIA6P61647 398 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 MTA1Q13330 715 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 RGL4Q8IZJ4 473 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 ZNF397Q8NF99 534 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-232ENST00000640653 TTC17Q96AE7 1141 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 TOE1Q96GM8 510 aaKnown RBP26.09■■□□□ 1.77
VEGFA-232ENST00000640653 VPS16Q9H269 839 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 ANO10Q9NW15 660 aa26.09■■□□□ 1.77
VEGFA-232ENST00000640653 SUN2Q9UH99 717 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms