RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RFC5P40937 340 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 SLC1A6P48664 564 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 DYNLL1P63167 89 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 LMBRD2Q68DH5 695 aaPredicted RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 EPS8L3Q8TE67 593 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CYP2A7P20853 494 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CYP4F2P78329 520 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CYP4F3Q08477 520 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 IL18R1Q13478 541 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 RASGRP2Q7LDG7 609 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 SSR3Q9UNL2 185 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 FGFR2P21802 821 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 GEMP55040 296 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 MED28Q9H204 178 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CUEDC1Q9NWM3 386 aaPredicted RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 KCNIP3Q9Y2W7 256 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 OR8H3Q8N146 312 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 FAM118BQ9BPY3 351 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 BTBD10Q9BSF8 475 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 INTS10Q9NVR2 710 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 IDH2P48735 452 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 GOLGA7BQ2TAP0 167 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 UCMAQ8WVF2 138 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 PIGKQ92643 395 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 MORF4L1Q9UBU8 362 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 AGRPO00253 132 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 SLC25A12O75746 678 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ASS1P00966 412 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ERCC2P18074 760 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF276Q8N554 614 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 GANQ9H2C0 597 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 KCNH1O95259 989 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 ITGALP20701 1170 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 UGT1A5P35504 534 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 FMO5P49326 533 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
UBE3A-228ENST00000638155 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 DLG3Q92796 817 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 CRISPLD1Q9H336 500 aa13.39□□□□□ -0.27
UBE3A-228ENST00000638155 NEDD4P46934 1319 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TFECO14948 347 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PDX1P52945 283 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 OLR1P78380 273 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF554Q86TJ5 538 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 DEPDC4Q8N2C3 294 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 NAT9Q9BTE0 207 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CROTQ9UKG9 612 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 C15orf41Q9Y2V0 281 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PLIN3O60664 434 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 NCK1P16333 377 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PRKAA1Q13131 559 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 IL18Q14116 193 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 VPS72Q15906 364 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 LRRC20Q8TCA0 184 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FATE1Q969F0 183 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CASZ1Q86V15 1759 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 METTL18O95568 372 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 LDOC1O95751 146 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 GLP2RO95838 553 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CASP1P29466 404 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 AMPD2Q01433 879 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 NAB2Q15742 525 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TXNRD1Q16881 649 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TFDP3Q5H9I0 405 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 GALNTL5Q7Z4T8 443 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 DYNLL2Q96FJ2 89 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 GREM2Q9H772 168 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TBC1D30Q9Y2I9 924 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CST8O60676 142 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TIPRLO75663 272 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FSHRP23945 695 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CDH4P55283 916 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 REXO1L1PQ8IX06 675 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms