RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 C11orf16Q9NQ32 467 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 HEBP1Q9NRV9 189 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 GPATCH2LQ9NWQ4 482 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 AP4E1Q9UPM8 1137 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 NEDD8-MDP1E9PL57 170 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 MOCS3O95396 460 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 TYRP14679 529 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 GLULP15104 373 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 COMTP21964 271 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 GJA4P35212 333 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 SOX9P48436 509 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 SGSHP51688 502 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 TAS2R40P59535 323 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 ZXDAP98168 799 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 ANO4Q32M45 955 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 RABGAP1LQ5R372 815 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 MPP7Q5T2T1 576 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 ARTNQ5T4W7 220 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 IER5LQ5T953 404 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 FYB2Q5VWT5 728 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 DAAM2Q86T65 1068 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
CLN6-216ENST00000636876 DDI1Q8WTU0 396 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 TEKT4Q8WW24 435 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 BHMTQ93088 406 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 GOLPH3Q9H4A6 298 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 ZWILCHQ9H900 591 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 WNT16Q9UBV4 365 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 PIAS3Q9Y6X2 628 aa16.53■□□□□ 0.24
CLN6-216ENST00000636876 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM86C2PA6NEL3 165 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 E9PAM4 449 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM72CH0Y354 149 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 DCXO43602 365 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 SPOPO43791 374 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 TBL1XO60907 577 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 L1CAMP32004 1257 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 CTHP32929 405 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 RPS24P62847 133 aaKnown RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 CA9Q16790 459 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 SMTNL2Q2TAL5 461 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 C5orf22Q49AR2 442 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM72AQ5TYM5 149 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 MANEALQ5VSG8 457 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 TTC39BQ5VTQ0 682 aaPredicted RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 RNF43Q68DV7 783 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 TXNRD3NBQ6F5E7 133 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM72DQ6L9T8 149 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 LRRC31Q6UY01 552 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 RALGPS2Q86X27 583 aaPredicted RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM72BQ86X60 149 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 IGSF8Q969P0 613 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 MSANTD3Q96H12 275 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 RPRD1AQ96P16 312 aaPredicted RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 DHX35Q9H5Z1 703 aaKnown RBP16.52■□□□□ 0.24
CLN6-216ENST00000636876 LZTFL1Q9NQ48 299 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 ARHGEF3Q9NR81 526 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 PLK2Q9NYY3 685 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 FBXL21Q9UKT6 434 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 CA14Q9ULX7 337 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
CLN6-216ENST00000636876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLN6-216ENST00000636876 ZNF318Q5VUA4 2279 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 IGLV3-10A0A075B6K4 115 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 TYW5A2RUC4 315 aaKnown RBP16.51■□□□□ 0.23
CLN6-216ENST00000636876 DRGXA6NNA5 263 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 CACNG3O60359 315 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 KRT7P08729 469 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 RARAP10276 462 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 GJC1P36383 396 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 AMPD2Q01433 879 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 SEMA3BQ13214 749 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 KCNT1Q5JUK3 1230 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 LRRC38Q5VT99 294 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 CFAP52Q8N1V2 620 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 HSPH1Q92598 858 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 EDAQ92838 391 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 KCTD15Q96SI1 283 aaPredicted RBP16.51■□□□□ 0.23
CLN6-216ENST00000636876 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLN6-216ENST00000636876 STIM2Q9P246 746 aa16.51■□□□□ 0.23
CLN6-216ENST00000636876 PIEZO1Q92508 2521 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms