RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ARHGAP36Q6ZRI8 547 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 STRADAQ7RTN6 431 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 CMC1Q7Z7K0 106 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 FAM35AQ86V20 835 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 ARID3BQ8IVW6 561 aaPredicted RBP19.43■□□□□ 0.7
CLN5-216ENST00000636780 ATP2A3Q93084 1043 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 AGAP2Q99490 1192 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 MIPEPQ99797 713 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 VPS11Q9H270 941 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 WDR6Q9NNW5 1121 aaKnown RBP19.43■□□□□ 0.7
CLN5-216ENST00000636780 PLLPQ9Y342 182 aa19.43■□□□□ 0.7
CLN5-216ENST00000636780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 ATP9BO43861 1147 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 NOS2P35228 1153 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 ZBTB16Q05516 673 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 CTC1Q2NKJ3 1217 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 SDHAF4Q5VUM1 108 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 FYB2Q5VWT5 728 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 ACVR1CQ8NER5 493 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 GORASP1Q9BQQ3 440 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 ZBTB24O43167 697 aaPredicted RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 ITM2AO43736 263 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 ENTPD5O75356 428 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 THP07101 528 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 DLDP09622 509 aaKnown RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 WARSP23381 471 aaKnown RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 ADRA1BP35368 520 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 ACADSBP45954 432 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 RPL34P49207 117 aaKnown RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 ARFIP2P53365 341 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 RPL10AP62906 217 aaKnown RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 CERCAMQ5T4B2 595 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 LRRTM3Q86VH5 581 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 GBP7Q8N8V2 638 aaPredicted RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 ZNF778Q96MU6 729 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 CAB39LQ9H9S4 337 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 KLHL8Q9P2G9 620 aaPredicted RBP19.42■□□□□ 0.7
CLN5-216ENST00000636780 FETUBQ9UGM5 382 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 PCDHA11Q9Y5I1 949 aa19.42■□□□□ 0.7
CLN5-216ENST00000636780 CFAP73A6NFT4 308 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 GABRDO14764 452 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 ALDOAP04075 364 aaKnown RBP19.41■□□□□ 0.7
CLN5-216ENST00000636780 ALDH3A1P30838 453 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 SLC8A3P57103 927 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 SEMA5AQ13591 1074 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 DLG2Q15700 870 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 LIMS2Q7Z4I7 341 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 EBF4Q9BQW3 602 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 UNKQ9C0B0 810 aaKnown RBP19.41■□□□□ 0.7
CLN5-216ENST00000636780 TPP1O14773 563 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 NDC80O14777 642 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 THPOP40225 353 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 PNPLA4P41247 253 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 DAOAP59103 153 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 ZBTB17Q13105 803 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 MFSD3Q96ES6 412 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 RTP3Q9BQQ7 232 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 TRIM55Q9BYV6 548 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 NMUR2Q9GZQ4 415 aa19.41■□□□□ 0.7
CLN5-216ENST00000636780 FAM159BA6NKW6 160 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 MSI1O43347 362 aaKnown RBP19.4■□□□□ 0.7
CLN5-216ENST00000636780 TROVE2P10155 538 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLN5-216ENST00000636780 SAT1P21673 171 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 AXLP30530 894 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 NR2C2P49116 596 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 SNX16P57768 344 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
CLN5-216ENST00000636780 CRHR2Q13324 411 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 NUDCD3Q8IVD9 361 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 TNS4Q8IZW8 715 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 TKTL2Q9H0I9 626 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 DAB1O75553 588 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 ANP32DO95626 131 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 ALADP13716 330 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 EML3Q32P44 896 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 OTOP3Q7RTS5 596 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 TOP6BLQ8N6T0 577 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 FAM13CQ8NE31 585 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 MCUQ8NE86 351 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 SHKBP1Q8TBC3 707 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 NCAPGQ9BPX3 1015 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 PHACTR1Q9C0D0 580 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 PNPLA8Q9NP80 782 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 SFMBT1Q9UHJ3 866 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 RPS6KL1Q9Y6S9 549 aa19.4■□□□□ 0.7
CLN5-216ENST00000636780 C2CD2LO14523 706 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 XPOTO43592 962 aaKnown RBP19.39■□□□□ 0.7
CLN5-216ENST00000636780 PSEN1P49768 467 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.7
CLN5-216ENST00000636780 CRYMQ14894 314 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 RWDD4Q6NW29 188 aaKnown RBP19.39■□□□□ 0.7
CLN5-216ENST00000636780 AGR3Q8TD06 166 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 RNF34Q969K3 372 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 NT5C3BQ969T7 300 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 MYLPFQ96A32 169 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 SSU72Q9NP77 194 aaKnown RBP19.39■□□□□ 0.7
CLN5-216ENST00000636780 MOCS1Q9NZB8 636 aa19.39■□□□□ 0.7
CLN5-216ENST00000636780 SMAPO00193 183 aa19.39■□□□□ 0.69
CLN5-216ENST00000636780 DIAPH2O60879 1101 aa19.39■□□□□ 0.69
CLN5-216ENST00000636780 MAGEA6P43360 314 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms